KEGG   Variovorax sp. 38R: IG196_11950
Entry
IG196_11950       CDS       T10235                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
vav  Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:vav00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vav02044]
    IG196_11950 (tssF)
Secretion system [BR:vav02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   IG196_11950 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: QOF81046
LinkDB
Position
2633986..2635866
AA seq 626 aa
MDPQLLEYYNRELVYMREAASEFAASHPKIARRLGMHGIEVADPYVERLIESFSFMSARM
QIKLDAEFPRFTQRLLEVLYPNYLSPTPSMAVAQLHPSVKEGDFTRGFVVPRGTAFHARV
PAGEQTPCEFRSSQDVTLWPFEIVEARLTGAPPDIPALERYVPPHVQVTGALRLRLRIVG
EMGFSALSGLDRLPIYLRGNEQVASHLFELLHTSAVATFVGEPGQLMDRPHVVTEGALVH
EGLAPGEGLLPLAWNTFHGHNLLHEYFACPERFYFFTLTQLAPGLARLPGKEVEIVVLLS
KPPGALGALVDAAQFALFSTPVVNLFERRTDRIELDTAQTEFHLVPDRSRPMDFEVYSVQ
RIAGQQARTTAEIDFRPLYQTLNEDEGNHGRYFSVRREPRLVSETARKYGTRTPYIGTEV
FLSLVDQQEAPYPESLRYLSVKAMLTNRDLPCLVPRNGQSDLAVADSIPVSAVGLIRPPS
TPKSPFAQREIAWRLIRQLGFNHLPLADMPHREGAQALRDMLRLFVTADNDVLRRQIDCL
VGSRIEPVTRRLPGAGPLIYGRGVQCTLSVDEEGFSGTSPYLLGLVLEHYLARHVSINVF
TQTTLESMQRGTVAKWPVRMGGRGAV
NT seq 1881 nt   +upstreamnt  +downstreamnt
atggacccgcaactcctcgagtactacaaccgggaactcgtctacatgcgcgaggcggcg
agcgagttcgccgcctcgcaccccaagatcgcccgccgcctgggcatgcacggcatcgag
gtggccgacccatatgtggagcggctcatcgagtcgttcagcttcatgtcggcgcgcatg
cagatcaagctcgacgccgaatttccgcgcttcacgcagcgtctgctcgaggtgctgtac
cccaactacctgagccccacgccgtcgatggccgtggcgcagctgcatcccagcgtgaag
gagggcgacttcacgcgcggcttcgtggtgccgcgcggcacggcctttcatgcgcgcgtg
cccgcgggcgagcagacgccgtgcgagttccgctccagccaggacgtgacgctgtggccc
ttcgagatcgtcgaagcgcggctcactggcgcaccgcccgacattccggcgctggagcgc
tatgtgccgccgcatgtgcaggtgacgggcgcgctgcgcctgcgcttgcgcatcgtgggc
gagatgggcttttcggcactgtcggggctcgaccggttgccgatctacctgcgcggcaac
gagcaggtggcgtcgcacctgttcgagctgctgcacacctcggcggtcgcgaccttcgtc
ggcgagccgggccagctgatggaccggccgcatgtggtgaccgaaggcgcgctggtgcat
gaagggctggcaccgggcgaaggcctgctgccgctggcgtggaacaccttccacggccac
aacctgctgcacgaatactttgcgtgccccgagcgcttctacttcttcacgctcacgcag
ctcgcgccggggctggcgcgccttcccggcaaggaggtcgagatcgtcgtgctgctgagc
aagccgcccggcgccctgggagcgctggtcgatgcggcgcagttcgcgctgttcagcacg
ccggtggtcaacctcttcgagcggcgcaccgaccgcatcgagctcgacacggcacagacc
gagttccacctcgtgcccgaccgttcgcggccgatggatttcgaggtgtattcggtgcag
cgcatcgccggccaacaggcgcgcaccacggccgagatcgacttccgcccgctctaccag
acgctcaacgaagacgagggcaaccacggccgctacttctcggtgcggcgcgagccgcgg
ctggtgtcagaaacggcgcgcaagtacggcacgcgcacgccgtacatcggcaccgaggtg
tttctgtcgctggtcgaccagcaggaggcgccgtaccccgagagcctgcgctacctgtcg
gtgaaggcgatgctcaccaaccgcgacctgccgtgcctcgtgccgcgcaacgggcagtcc
gacctcgcggtggccgattcgatcccggtgtcggccgtgggcctcatccgtccgccgagc
acgcccaagtcgccgttcgcgcagcgcgagatcgcgtggcggctgatccgccagctgggc
ttcaaccacctgccgctggccgacatgccgcaccgcgagggcgcgcaggcgctgcgcgac
atgctgcggctgttcgtcacggccgacaacgacgtgctgcgccggcagatcgattgcctc
gtcggctcgcgcatcgagcccgtgacgcggcgcctgccgggcgcggggccgctgatctac
gggcgcggcgtgcaatgcacgctgagcgtcgatgaggaagggttttcgggcacgagcccg
tacctgctggggctggtgctggagcactacctcgcgcggcacgtgagcatcaacgtgttc
acgcagaccacgctcgaatcgatgcagcgcggcactgtcgcgaagtggcccgtgcgaatg
ggcgggcgcggggccgtctag

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