Variovorax sp. 38R: IG196_12865
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Entry
IG196_12865 CDS
T10235
Name
(GenBank) cysteine--tRNA ligase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
vav Variovorax sp. 38R
Pathway
vav00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IG196_12865
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vav01007
]
IG196_12865
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vav03016
]
IG196_12865
Enzymes [BR:
vav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
IG196_12865
Amino acid related enzymes [BR:
vav01007
]
Aminoacyl-tRNA synthetase
Class I (G)
IG196_12865
Transfer RNA biogenesis [BR:
vav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
IG196_12865
Prokaryotic type
IG196_12865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
DALR_2
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1f
CysS_C
T3SS_basalb_I
Motif
Other DBs
NCBI-ProteinID:
QOF81214
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All DBs
Position
2834961..2836337
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AA seq
458 aa
AA seq
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MSLRIYNTLSRELEEFSPLQPGQVRMYVCGMTVYDLCHIGHARMMMAFDVVQRWLRASGY
AVTYVRNITDIDDKIIARAVQRGITIRALTDEVIAAMHEDIGALRIEPPTIEPRATEYVP
QMLGIIETLERKGLAYRSDNGDVNYAVRKFPGYGKLSGKSLDELHAGERVAVLDGKQDPL
DFVLWKSAKPTEPDDAKWESPFGTGRPGWHIECSAMSCATLGETFDIHGGGADLQFPHHE
NEIAQSEGANGKPLSRFWVHNGFVRVDNEKMSKSLGNFFTIREVLQKYDAESLRFFLVRT
HYRSALNYSDAHLDDARNSLKRLYTALDLVAPGAVTIDWTQPHAARFKAAMDEDFGTPEA
IAVLFELAGEVNRTKSADTAGLLKALAGTLGLLQGDPKAFLQAGTTLDEATIQSKIDARA
AAKAAKNFAEADRIRQELLEQGIVLKDSPTGTTWAAAQ
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgcgcatctacaacacgctgtcgcgtgaattggaggaattctcccccctgcaa
cctgggcaggttcgcatgtacgtgtgcggcatgacggtctatgacctgtgccacatcggc
catgcccgcatgatgatggcgttcgacgtggtgcagcgctggctgcgcgccagcggctat
gccgtgacctacgtgcgcaacatcaccgacatcgacgacaagatcatcgcccgcgcggtc
cagcgcggcatcaccatccgtgcgctgaccgacgaggtgatcgcggccatgcacgaggac
atcggtgcactgcgcatcgagccgcccaccatcgagccgcgcgccaccgaatacgtgccg
cagatgctcggcatcatcgagacgctggagcgcaagggtctggcctaccgctcggacaac
ggcgacgtgaactacgcggtgcgcaagttccctggctacggcaagctctcgggcaagtcg
ctcgacgaactgcacgcgggcgaacgcgtcgcggtgctcgacggcaagcaggacccgctc
gacttcgtgctctggaaatccgccaagccgaccgagcccgacgacgccaaatgggaaagc
cccttcggcaccggccgcccgggctggcacatcgagtgctcggccatgagctgcgccacg
ctcggcgaaaccttcgacatccacggcggtggcgcagacctgcagttcccgcaccacgaa
aacgaaattgcgcagagcgaaggcgccaacggcaagccgctctcgcgcttctgggtgcac
aacggcttcgtgcgcgtggacaacgagaagatgtccaagagcctgggcaacttcttcacc
atccgcgaagtgctgcagaagtacgacgccgaaagcctgcgtttcttcctggtgcgcacg
cattaccgcagcgcgctcaactacagcgacgcccacctcgacgacgcgcgcaactcgctc
aaacgcctgtacaccgcgctcgacctggtggcgccaggggccgtgaccatcgactggacg
cagccccacgccgcacgtttcaaggcggcgatggatgaagacttcggtacgcccgaagcc
atcgccgtgttgttcgaactggccggcgaagtcaaccgcaccaagtccgcagacaccgcg
ggtctgctcaaggcgctggccggaacgctgggtcttctgcaaggcgacccgaaggcgttt
ctgcaagctggcaccacgctcgacgaagccacgatccagtcgaagatcgacgcacgcgca
gcggccaaggctgcgaagaatttcgccgaggccgatcgcattcgccaggagctcctcgag
cagggcatcgtgctcaaggattcgcccacgggaacgacctgggcggctgcacagtga
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