Variovorax sp. 38R: IG196_13070
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Entry
IG196_13070 CDS
T10235
Name
(GenBank) substrate-binding domain-containing protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vav Variovorax sp. 38R
Pathway
vav02010
ABC transporters
vav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IG196_13070
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IG196_13070
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_13070
Transporters [BR:
vav02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
IG196_13070
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
QOF81250
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All DBs
Position
2873100..2874287
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AA seq
395 aa
AA seq
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MHRRHLIALAALGATAATLPAWAQSNEIRIAHVYSKTGALEAYGKQTQTGLMMGLNYATG
GTMMVNGKKLVVLEKDDQGKPDLGKSLLAAAYSDDKAALAVGPTASGVALAMLPVAEEYK
KILIVEPAVADSITGDKWNKYIFRTGRNSSQDAISNAVAIDKAGVTVATLAQDNAFGRDG
VKAFGAALKKAKLAHEEYLPPTTTDFTAGAQRLIDKLKDQPGRKIIWIVWAGAGNPFKIV
DLDLKRYGIEIATGGNILPAMAAYKSLPGMEGAAYYYFGIPKNPVNEALVAAHYKEFKTP
PDFFTAGGFSAAMAVVTALKKTNGDTNTNKLISTMEGMSFDTPKGKMTFRKEDHQAMQSM
YHFKIKADPAFAWGVPELVHEIKPEEMDIPIKNKR
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgtcgccacctcatcgccctggccgccctgggcgccaccgccgcaaccctgccc
gcctgggcccaatcgaacgagatccgcatcgcccacgtctacagcaagaccggcgcgctg
gaggcctacggcaagcagacgcagaccggcctgatgatgggcctgaactacgccaccggc
ggcacgatgatggtcaacggcaagaagctcgtggtcctcgagaaggacgaccagggcaag
cccgacctgggcaagtcgctgctggctgctgcgtactccgacgacaaggccgcgctcgcg
gtcggcccgaccgcttcgggcgtggcactggcgatgctgccggtggccgaggaatacaag
aagatcctgatcgtcgagcccgccgtggccgactcgatcaccggcgacaagtggaacaag
tacatcttccgcaccggccgcaactcgagccaggacgccatctccaacgccgtggccatc
gacaaggccggcgtcaccgtcgccacgctcgcacaagacaacgccttcggccgcgacggc
gtgaaggccttcggcgctgcgctgaagaaagccaagctcgcgcacgaggaatacctgccg
cccacgaccaccgacttcacggccggcgcgcagcgcctgatcgacaagctgaaggaccag
ccgggccgcaagatcatctggatcgtctgggccggcgcgggcaacccgttcaagatcgtc
gacctcgacctgaagcgctacggcatcgagatcgccaccggcggcaacatcctgccggcc
atggcggcctacaagtcgctgccgggcatggaaggcgcggcctactactacttcggcatc
ccgaagaacccggtgaacgaggcgctggtcgcggcccactacaaggaattcaagacgccg
ccggacttcttcacggccggcggtttctcggccgcgatggcggtggtgacggcgctgaag
aagaccaacggcgacaccaacaccaacaagctcatcagcaccatggaaggcatgagcttc
gacacgcccaagggcaagatgaccttccgcaaggaagaccaccaggcgatgcagtcgatg
taccacttcaagatcaaggccgacccagcgttcgcgtggggcgtgcccgagctggtgcac
gagatcaagcccgaagagatggacatccccatcaagaacaagcgctga
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