Variovorax sp. 38R: IG196_14485
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Entry
IG196_14485 CDS
T10235
Name
(GenBank) MATE family efflux transporter
KO
K26937
MATE family, multidrug efflux pump
Organism
vav Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_14485
Transporters [BR:
vav02000
]
Solute carrier family (SLC)
SLC47: Multidrug and toxin extrusion (MATE) family
IG196_14485
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Paralog
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-ProteinID:
QOF81501
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Position
3162198..3163640
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AA seq
480 aa
AA seq
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MSAAPDSSSTTTTSSPGNPSGLRGVPVAPVGAARPLWKVFLFFLAPMLLSNILQSLSGTI
NNVYVGQMLGVSALAAVSSFFPVMFFFIAFIIGLGAGASVLIGQAWGARDAAKAKAVAGT
TLTVGLLLGLAIAVFGGVFTTPMLAMLGTPPDVLADSTRYARIMLIAMPGVFLFLLATAM
LRGVGDTITPLLTLLISTAIGLVVTPALIRGWGGLPQLGVAAGAWASVLSFAVATTWLGF
RLRQKKSPLAPDAEFVRCLRIQPQLLKAVLKIGVPTGVQMIVVALAEVVLLSMVNSYGSN
ATAAYGAVNQVVAYVQFPAISIAITTSILGAQAIGAGRANRLGAIVQTALGMNLVLTGGL
VLLGYLFSRPLMGFFITSAPVIEIAQNLLHIMLWSMVLFGMASAVSGIMRASGSVLVPTL
ITIACILGVEVPVAWLMSRHFGLGLDGIWIAYPVTFGAMLLLQTAYYRLVWRKKSIGRLV
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggcgcccgacagcagcagcaccacaaccaccagcagccccggcaacccgagc
ggcctgcggggcgtgcccgtggcgcccgtgggtgcggcgcgtccgctgtggaaggtgttc
ctgttcttcctggcgccgatgttgctcagcaacatcctgcagtcgctctccggcaccatc
aacaacgtctacgtcgggcagatgctcggcgtgagcgcgctggcggcggtgtcgagcttc
ttcccggtgatgttcttcttcatcgccttcatcatcggcctgggcgccggcgcctcggtg
ctcatcggccaggcctggggcgcgcgcgacgcggcgaaggccaaggcggtggcgggcacc
acgctcacggtgggcctgctgctggggctggcgatcgcggtgttcggcggggtcttcacc
acgccgatgctggccatgctgggcacgccgcccgacgtgctggccgactccacgcgctac
gcccgcatcatgctgatcgcgatgcccggcgtgttcctgttcctcctggccaccgccatg
ctgcgcggcgtgggcgacaccatcacgccgctgttgacgctcttgatttccacggccatc
ggcctcgtcgtcacgcccgcgctcatccgcggctggggcgggttgccgcagctcggcgtg
gcagcgggcgcgtgggcctcggtgctgtcgttcgcggtcgcgaccacgtggctgggcttc
cggctgcgccagaaaaagagcccgctcgcgcccgatgcggagttcgtgcgttgcctgcgc
atccagccgcagctgttgaaggcggtgctgaagatcggcgtgcccacgggcgtgcagatg
atcgtggtggcgctggccgaagtggtgctgctgtcgatggtcaacagctacggctcgaac
gccacagccgcctacggcgcggtgaaccaggtggtggcctacgtgcagttcccggccatc
tcgatcgcgatcaccacgtcgatcctcggtgcacaggcgatcggcgcgggccgcgccaac
cggctcggtgccatcgtgcagaccgcgctgggcatgaacctcgtgctcacgggcgggctg
gtgctgctgggctatctgttctcgcgcccgctcatgggcttcttcatcaccagcgcaccg
gtgatcgagattgcgcagaacctgctgcacatcatgctgtggagcatggtgctgttcggc
atggcctcggcggtgtcggggatcatgcgcgccagcggctcggtgctcgtgccgacgctc
atcaccatcgcctgcatcctgggcgtggaagtgccggtggcctggctcatgagccgccac
ttcggcctgggcctggacgggatctggatcgcctacccggtcaccttcggcgcgatgctg
ttgctgcagaccgcgtactaccggctggtgtggcgcaagaagtcgatcggccggctggtc
tga
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