Variovorax sp. 38R: IG196_14920
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Entry
IG196_14920 CDS
T10235
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
vav Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vav03036
]
IG196_14920 (smc)
Chromosome and associated proteins [BR:
vav03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
IG196_14920 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
SMC_hinge
ABC_tran
AAA_29
YbbR
DUF1664
Motif
Other DBs
NCBI-ProteinID:
QOF81579
UniProt:
A0A7L8SNM8
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All DBs
Position
complement(3261938..3265453)
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AA seq
1171 aa
AA seq
DB search
MRLNSIKLSGFKSFAEPTNFLLPGQLVGVVGPNGCGKSNIMDAVRWVLGESRASELRGES
MQDVIFNGTTTRKQASRSSVELVFDNADHRAGGQWNQFTEIAVRRVLTRDGTSSYYINNQ
PVRRRDVQDVFLGTGLGPRAYAIIGQGTISRIIESKPEELRLFLEEAAGVSKYKERRRET
ENRLGDTRENLTRVEDILRELNANLEKLEKQAEVAARYNALQGDATKKQHQLWFLKRGES
DADQAKIKADSEKAINDLESRTADLRRIESELETVRQAHYGAGDLVNQAQGKLYEASAEV
GRLEGEIRFVVEGRQRVEQRLVQLREQMGQWGRRREEAEAEIETLAGAGVDAEEQAILLA
AQLEEHDARLPDLEEAVQRAQNEANTQRATVSQVQQQIQVLAADQRNIEDQSRQLTLRSE
RLRADQNALAAPDEDRLTEMQEQLAAAQEAASESDARLQELQEAVPQLDEDRRAKQQAVN
TEGARHAEFSARLEALRALQEKVKTDGKLAPWLAKHGLDGLQGLWSRIHIEQGWESALEA
ALRERLGALEVSRLDMVRAFGNDAPPAKLAFYSPPAAGVPQAAGALPKLSSLLRLNDAGQ
QALLNDWLYGCFTAETFEEALAQRATLQPGEVIYVRSGHAVSSHSVNFYAPDSEQAGLLA
RQQEMENLERQLKAQTLINEEARTALVRAEAAYGDAAQRLVTARREAAETQSRAHELQVE
TLRMTQLAEQTRARSQQLAADLGEVDAQLEELQEKRIAAEGRFEELDMQLADSQERHAQL
DERVIEAGRTLNASREQHRSLERQAQEATFSQRTLEARRGELNRSIETASQQTVALTDED
ERARAELSRLSDAAAQAGLQDALSLKLERETALGAARSQYDDLTLKLRASDERRLQLERE
LDPLRQRITEFQLKEQAARLGVEQYQQLLDDAGADLEAVAQSIETEKVRLTGLQSEIDRL
NREVVALGAVNLAALDELAIASERKIFLDAQSADLNEAIGTLEDAIRKIDAETRDLLGGT
FKIVNEHFSRMFPELFGGGNARLVMTGDEILDAGVQVLAQPPGKKNQTIHLLSGGEKALT
AIALVFAIFQLNPAPFCLLDEVDAPLDDANTERYAKLVTAMSRETQFLFISHNKIAMEMA
EQLIGVTMQEQGVSRIVAVDMESAASMVEAA
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtcttaactccatcaagctctcgggcttcaagtcgttcgccgaacccaccaacttc
ctgctgccgggccaactggtcggggtggtggggccgaacggctgcggcaagtcgaacatc
atggacgccgtgcgctgggtgctcggcgagtcgcgtgcgtcggaactgcgcggcgagtcg
atgcaggacgtgatcttcaacggcacgaccacccgcaagcaagccagccgttcgagcgtc
gagctggtgttcgacaacgccgaccaccgcgccggcggccagtggaaccagttcaccgaa
atcgccgtgcgccgcgtgctcacgcgcgacggcaccagcagctactacatcaacaaccag
ccggtgcgccgccgtgacgtgcaggacgtgttcctgggcaccggcctcgggccgcgcgcc
tacgccatcatcggccagggcacgatcagccggatcatcgaatccaagcccgaagaactg
cgcctgttcctcgaagaagccgcgggtgtctccaagtacaaggagcgccgccgcgaaacc
gagaaccgcctgggcgacacgcgcgagaacctcacgcgcgtcgaagacatcctgcgcgaa
ctcaacgccaacctcgaaaagctcgagaagcaggcggaggtggcggcgcgctacaacgcg
ttgcagggcgatgccacgaagaagcagcaccagctgtggttcctcaagcgcggtgaaagc
gatgccgaccaggccaagatcaaggccgattcggaaaaggccatcaacgacctcgaatcg
cgcaccgccgacctgcgccgcatcgagtccgaactcgaaaccgtgcgccaggcccactac
ggcgccggcgacctggtgaaccaggcgcagggcaagctgtacgaagccagcgccgaagtc
ggccggctcgaaggcgagatccgcttcgtggtcgaaggccgccagcgcgtcgagcagcgc
ctggtgcaactgcgcgaacagatgggccagtggggccgccgccgcgaagaagccgaagcc
gaaatcgagacgctggctggtgccggcgtcgatgccgaagagcaggccatcctgctggcc
gcgcagctcgaagagcacgacgcacgcctgcctgacctcgaagaggccgtgcagcgtgcg
cagaacgaagccaacacccagcgcgccacggtgtcgcaggtgcagcagcagatccaggtg
ctggccgccgaccagcgcaacatcgaagaccagagccgccagctcacgctgcgcagcgag
cgcctgcgcgccgaccaaaatgcgctggccgcacccgatgaagaccggctgaccgaaatg
caggagcagctggccgcggcgcaagaagccgccagcgagtccgatgcccgcctgcaggaa
ctgcaggaggccgtgccgcagctcgacgaggaccgtcgcgccaagcagcaggccgtcaac
accgagggcgcccgccacgccgagttctcggcccgcctcgaagcgctgcgcgcgctgcag
gagaaggtcaagaccgacggcaagctcgcgccctggctcgccaagcacggcctcgacggc
ctgcaaggcctgtggagccgcatccacatcgaacagggctgggagagcgcgctcgaagcc
gcgttgcgcgagcgcctgggcgcgctcgaagtcagccggctcgacatggtgcgtgccttc
ggcaacgacgcgccgcccgccaagctcgccttctacagcccgcctgccgccggcgtaccg
caagccgcgggcgcactgcccaagctctcgagtctcctgcgcctgaacgacgctggccag
caagcgctgctgaacgactggctgtacggctgcttcacggctgagactttcgaagaggcg
ctggcccagcgcgccacgctgcagcccggcgaggtgatctacgtgcgcagcggccatgcc
gtgtcgtcgcacagcgtgaacttctacgcgcccgattccgagcaggccggcctcctggcc
cgccagcaggaaatggaaaacctcgagcgccagctcaaggcccagacgctcatcaacgaa
gaggcgcgcaccgcgctggtccgcgccgaagccgcgtacggcgatgccgcgcagcgcctc
gtcacggcccgccgcgaagccgccgaaacgcagtcgcgcgcccatgaactgcaggtcgaa
acgctgcgcatgacgcagctcgctgaacaaactcgcgcgcgcagccagcagctggccgcc
gacctcggcgaggtcgatgcccagctcgaagagctgcaagaaaaacgcatcgccgccgaa
ggccgcttcgaagagctcgacatgcaactggccgacagccaggagcgccatgcgcagctc
gacgagcgcgtgatcgaggccggtcgcacgctgaatgccagccgcgaacagcaccgcagc
ctcgagcggcaggcgcaggaagccaccttctcgcagcgcacgctcgaagcgcgtcgcggc
gaactgaaccgcagcatcgaaaccgcctcgcagcagaccgtcgcgctgaccgacgaagac
gagcgcgcccgcgccgagctgagccgcctgtcggacgccgccgcgcaagccggcctgcag
gatgcgctgtcgctcaagctggagcgcgagaccgccttgggcgcggcgcgcagccagtac
gacgatctcacgctcaagctgcgcgccagcgacgaacgccggctgcagctcgaacgcgaa
ctcgatccgctgcgccagcgcatcaccgagttccagctcaaggaacaggccgcgcgcctg
ggtgtcgagcagtaccagcagttgctggacgacgccggtgccgacctcgaagcggtcgcg
caatcgatcgagaccgagaaggtgcgcctgaccggcttgcaaagcgaaatcgatcggctg
aaccgcgaagtggtcgcgctgggcgccgtcaacctcgccgcgctcgacgaactcgcgatt
gcgagcgagcgcaagatcttcctggacgcgcagtcggccgacctgaacgaagccatcggc
acgctcgaagacgccatccgcaagatcgacgccgaaacgcgcgacctgctcggcggcacc
ttcaagatcgtcaacgagcacttcagccgcatgttccccgagctgttcggcggcggcaat
gcacgcctcgtgatgaccggcgacgaaatcctcgatgccggtgtgcaggtgctcgcgcag
ccgcccggcaagaagaatcagaccatccacctgctctcgggcggcgagaaggcgctcacg
gccattgcgctcgtgttcgccatcttccaactcaacccggcgcctttctgtctgctggac
gaagtggacgcgccgctggacgacgccaacaccgaacgctacgccaaactcgtgaccgcc
atgagccgtgaaacccagttcctcttcatcagccataacaagatcgccatggaaatggcc
gaacagctgatcggcgtgaccatgcaggagcagggcgtgtcgcgcatcgttgcggtcgac
atggagtcggcggcctcgatggtcgaagcggcataa
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