Variovorax sp. 38R: IG196_15215
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Entry
IG196_15215 CDS
T10235
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vav Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vav03016
]
IG196_15215 (truB)
Enzymes [BR:
vav01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IG196_15215 (truB)
Transfer RNA biogenesis [BR:
vav03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IG196_15215 (truB)
Prokaryotic type
IG196_15215 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QOF81633
LinkDB
All DBs
Position
complement(3317569..3318525)
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AA seq
318 aa
AA seq
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MNAPRTRVQRRPVHGVLLLDKPLGFSSNQALQKAKWLLRAEKAGHTGTLDPLATGVLPLC
FGAATKFSQLHLDADKTYEAIARLGVKTSTGDAEGEVIAERPVQVSPEDLARVEALFTGP
IRQVPPMHSALKKDGKALYEYAREGIEIERAPRDVVIYKLALTRLDDTSIRIVASVSKGT
YIRTLGEDIGEALGCGAHLSFLRRTATGGFGEAQCVTIEALEAMTEDERLARLLPAEALV
EGHSRVTLAAEDAARFLSGLRRRGGWADAEAVAVFGTDPQAFLGTAHVSAGELIPGRLLN
PIEIQQILLNAPQTEATP
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgccacgcacacgggtgcagcggcgccctgtgcatggggtgttgctgctcgac
aagccgctggggttttccagcaaccaggccttgcaaaaggccaagtggttgctgcgcgcc
gaaaaagcgggccataccggcacgctcgatccgctcgcgacaggcgtgctgccgctttgt
ttcggcgccgccaccaaattcagtcaactgcacctcgacgccgacaagacgtacgaggcg
attgcgcgcctgggcgtcaagacgtccaccggtgacgccgagggcgaggtgatcgccgag
cgcccggtgcaggtgtcgccagaagacctggcccgcgtcgaagcgctgtttacaggcccg
atccgccaggtgccgccgatgcacagtgcgctcaagaaagacggcaaagcgctgtacgag
tacgcacgcgaaggcatcgagatcgagcgcgcgccgcgcgacgtcgtcatctacaagctc
gcgctgacgcggctggacgacacaagcatccgcatcgttgcgagcgtgagcaagggcacc
tacattcgcaccctgggcgaggacatcggcgaggcactgggctgcggcgcgcacctgagc
ttcctgcgccgcacggccacgggcggtttcggcgaggcgcagtgcgtcacgatcgaggcg
ctcgaagccatgaccgaagacgagcgcctggcacgcctgttgcctgccgaagcgctggtc
gagggccacagccgcgtcacgctcgccgccgaagatgcggcacgttttctttcgggcctg
cgccgccgcggcggctgggccgatgccgaagcggtggccgtgttcggcaccgacccgcag
gcgttcctgggcaccgcccatgtgagcgccggcgaactgatcccggggcgcttgctgaac
cccatcgaaattcagcaaattcttttgaacgcaccacagaccgaagcgacaccatga
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