Variovorax sp. 38R: IG196_15230
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Entry
IG196_15230 CDS
T10235
Symbol
nusA
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
vav Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vav03021
]
IG196_15230 (nusA)
03009 Ribosome biogenesis [BR:
vav03009
]
IG196_15230 (nusA)
Transcription machinery [BR:
vav03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
IG196_15230 (nusA)
Ribosome biogenesis [BR:
vav03009
]
Prokaryotic type
rRNA transcription factors
IG196_15230 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
KH_NusA_C
KH_1
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QOF81636
UniProt:
A0A7L8SP75
LinkDB
All DBs
Position
complement(3321929..3323413)
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AA seq
494 aa
AA seq
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MNREMLMLVDAISREKNVERDVVFGAVESALAQATKKLHQGDVDIRVAVDRDSGDYETFR
RWHVVPDEAGLQLPDQEILLFEAKEEMSDIEVGEYIEESVDSVPIGRIGAMAAKQVILQK
IRDAEREMLLNDFMSRGDKIFVGTVKRLDKGDIIVEAGRVEGRLRRSEMIAKENLRNGDR
VRAMIMEVDLTLRGAPIILSRSAPEFMIELFRQEVPEIEQGLLEIKSCARDPGSRAKIAV
LSHDKRVDPIGTCVGVRGTRVNAVTNELAGERVDIVLWSEDPAQFVIGALAPANVSSIVV
DEEKHAMDVVVDEENLAIAIGRGGQNVRLASDLTGWKINIMDANESAQKQAVETDTSRKL
FMEKLDVDEEIADILISEGFNSLEEVAYVPISEMLEIEAFDEDTINELRARAKDALLTME
IAKEEGVETVSQNLRDLEGLNPDLIPQLAEAGVNTRDDLADLAVDELTEITGLSADDAKA
LILKAREHWFAGQE
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcgaaatgttgatgttggtggatgcgatctcgcgcgagaagaacgtcgaacgc
gacgtggtcttcggcgcagtcgaatccgcactggcgcaagccaccaagaagctccatcag
ggtgacgtggatatccgcgtggcggtcgatcgcgacagcggcgactacgaaactttccgc
cgttggcacgtcgttcccgatgaggccggcctgcagctgcccgaccaggaaatcctcctg
ttcgaggccaaggaagaaatgtcggacatcgaagtcggcgagtacatcgaggaatcggtg
gactcggtgccgatcggccgcattggcgccatggctgccaagcaggtgatcctgcagaag
atccgcgacgccgagcgcgagatgttgctcaacgacttcatgtcgcgcggcgacaagatc
ttcgtgggcaccgtcaagcgcctggacaagggcgacatcatcgtggaagccgggcgcgtc
gaaggccgcctgcgccgcagcgagatgattgccaaggaaaacctgcgcaacggcgaccgc
gtgcgggccatgatcatggaggtcgacctgacgctgcgcggcgcgccgatcatcctgtcg
cgctcggcccccgagttcatgatcgagctgttccgccaggaagtgcccgaaatcgaacaa
ggcctgctcgaaatcaagagctgcgcccgtgaccccggttcgcgcgccaagatcgccgtg
ctctcgcacgacaagcgtgtcgacccgatcggcacctgcgtcggcgtgcgcggcacccgc
gtcaacgccgtgaccaacgaactcgctggcgagcgcgtggacatcgtgctgtggagcgaa
gacccggcccagttcgtgatcggcgccctggcgccggccaacgtctcgtcgattgtggtc
gatgaagaaaagcacgccatggacgtggtggtcgacgaggaaaacctcgcgatcgccatc
ggccgcggcggccagaacgtgcgtctggcttccgacctcaccggttggaagatcaacatc
atggacgccaacgagtcggcccagaaacaggccgtcgaaaccgataccagccgcaagctt
ttcatggaaaagctcgatgtcgacgaggaaatcgccgacatcctgatttcggaggggttc
aacagcctcgaagaggtggcctacgtgccgatctccgagatgcttgagatcgaggccttc
gacgaagacaccatcaatgagctgcgcgcccgtgcaaaggatgcgctgctgaccatggaa
atcgccaaggaagaaggcgtcgaaaccgtttcgcagaacctgcgtgacctcgaaggcctc
aaccccgacctgattccccagttggccgaagcgggtgtgaacacccgtgacgacctggcc
gacctcgcggtcgatgaactcaccgaaatcaccggcctgagcgccgatgacgccaaagcc
ctcatcttgaaagcccgcgaacattggttcgccggccaagagtga
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