KEGG   Variovorax sp. 38R: IG196_17375
Entry
IG196_17375       CDS       T10235                                 
Name
(GenBank) HlyD family efflux transporter periplasmic adaptor subunit
  KO
K12542  membrane fusion protein, adhesin transport system
Organism
vav  Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:vav00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vav02000]
    IG196_17375
   02044 Secretion system [BR:vav02044]
    IG196_17375
Transporters [BR:vav02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   IG196_17375
Secretion system [BR:vav02044]
 Type I secretion system
  Adhesin protein transporter
   IG196_17375
SSDB
Motif
Pfam: Beta-barrel_AprE HH_AprE BSH_CusB BSH_RND BSH_YknX BSH_CzcB Biotin_lipoyl BSH_Fcp1 BSH_YhbJ DUF4131 Peptidase_M23
Other DBs
NCBI-ProteinID: QOF81959
LinkDB
Position
complement(3750955..3752100)
AA seq 381 aa
MSEGGRLQRVRASRTIWLVVLVLVLLIAWAAWAQVNEVTRGRGRVTPFSRMQSVQSLEGG
ILTELRVREGDIVQVGQPLARIDSTRFQSAYNETDVQINTLAAEIDRLESEVNEKAELNF
QGQADEKTRRAESALFKARRTRLNKAVAALQEQERILDRQIAMVQPLVSKRAVPESELLQ
LQQQGAALRGRIGELRNQYVQEAYSNLVDKKAKMVALQESMLQKKDQLDRTMVMAHVAGR
VNNVRINSVGGVIQPGETIMEISPINERLVVETLVEPRDVAFIAPGMPASVKITAYDYSV
YGDLRGTVTQISEDTVKEETPRGPQEYYRIMVTTDSAYLDKNEKGVQLPIRPGMVAEVDI
ETGRRSILSYLTRPLQKARLR
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgtcggagggcgggcgcctccagcgcgtgcgggccagccgcaccatctggctcgttgtc
ctcgtcctggtgctgctgattgcctgggccgcctgggcgcaagtcaatgaagtcaccaga
ggacgtggccgcgtgacgcctttctcccgcatgcaatccgtccagagcctggagggcggc
atcctgaccgaactgcgggtgcgcgagggcgacatcgtgcaggtgggccagcccctggcc
cgcatcgacagcacgcgcttccagtcggcctacaacgaaaccgacgtccagatcaatacg
ctggcagccgagatcgaccgcctcgagagcgaggtcaacgagaaggccgaactgaacttc
caggggcaagcagatgaaaagacgcgacgcgccgaatcggcgctgttcaaggcacgtcgc
acgcgactgaacaaggccgtcgccgcgctgcaggaacaggagcgcattctcgatcgccag
attgcgatggtccagcccttggtgagcaagcgggcagtgcccgagtccgaactcctgcag
ttgcagcagcagggcgccgcgctgcgcgggcgcatcggcgagctgcgcaaccagtatgtc
caggaggcctacagcaacctggtcgacaagaaggccaagatggtggccctgcaagagagc
atgctgcagaagaaggaccaactggatcgcaccatggtcatggctcacgtggcggggcgg
gtcaacaacgttcgcatcaactccgtcgggggcgtgatccagccgggcgagaccatcatg
gagatcagccccatcaacgaacgcctggtggtggagacgctggtggagccaagggacgtg
gctttcattgcgccggggatgccggccagcgtcaagatcacggcctatgactattccgtg
tacggcgacctgcggggcaccgtcacacagatttccgaagataccgtcaaggaagaaacg
ccgcgcggtccccaggagtactaccgcatcatggtcaccacggacagcgcctacctggac
aagaacgagaaaggcgtgcagctgcccatacgtcccggcatggtcgccgaggtcgacatc
gaaacggggcgcaggtccatcctgagctatctcacgcggccgcttcagaaagcgcgcctg
cgatag

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