Variovorax sp. 38R: IG196_17900 Help Entry IG196_17900       CDS       T10235                                  Symbol lpdA Name (GenBank) dihydrolipoyl dehydrogenase   KO K00382   dihydrolipoyl dehydrogenase [EC:1.8.1.4] Organism vav  Variovorax sp. 38R Pathway vav00010   Glycolysis / Gluconeogenesis vav00020   Citrate cycle (TCA cycle) vav00260   Glycine, serine and threonine metabolism vav00280   Valine, leucine and isoleucine degradation vav00310   Lysine degradation vav00380   Tryptophan metabolism vav00620   Pyruvate metabolism vav00630   Glyoxylate and dicarboxylate metabolism vav00640   Propanoate metabolism vav00670   One carbon pool by folate vav00785   Lipoic acid metabolism vav01100   Metabolic pathways vav01110   Biosynthesis of secondary metabolites vav01120   Microbial metabolism in diverse environments vav01200   Carbon metabolism vav01210   2-Oxocarboxylic acid metabolism vav01240   Biosynthesis of cofactors Module vav_M00009   Citrate cycle (TCA cycle, Krebs cycle) vav_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate vav_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA vav_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA vav_M00621   Glycine cleavage system Brite KEGG Orthology (KO) [BR:vav00001]  09100 Metabolism   09101 Carbohydrate metabolism    00010 Glycolysis / Gluconeogenesis     IG196_17900 (lpdA)    00020 Citrate cycle (TCA cycle)     IG196_17900 (lpdA)    00620 Pyruvate metabolism     IG196_17900 (lpdA)    00630 Glyoxylate and dicarboxylate metabolism     IG196_17900 (lpdA)    00640 Propanoate metabolism     IG196_17900 (lpdA)   09105 Amino acid metabolism    00260 Glycine, serine and threonine metabolism     IG196_17900 (lpdA)    00280 Valine, leucine and isoleucine degradation     IG196_17900 (lpdA)    00310 Lysine degradation     IG196_17900 (lpdA)    00380 Tryptophan metabolism     IG196_17900 (lpdA)   09108 Metabolism of cofactors and vitamins    00785 Lipoic acid metabolism     IG196_17900 (lpdA)    00670 One carbon pool by folate     IG196_17900 (lpdA)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:vav04147]     IG196_17900 (lpdA) Enzymes [BR:vav01000]  1. Oxidoreductases   1.8  Acting on a sulfur group of donors    1.8.1  With NAD+ or NADP+ as acceptor     1.8.1.4  dihydrolipoyl dehydrogenase      IG196_17900 (lpdA) Exosome [BR:vav04147]  Exosomal proteins   Exosomal proteins of breast cancer cells    IG196_17900 (lpdA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox FAD_oxidored GIDA BSH_YknX Thi4 AlaDh_PNT_C FAD_binding_2 NAD_binding_8 DEC-1_N Pyr_redox_3 HI0933_like FAD_binding_3 BSH_CusB DAO BSH_RND GCV_H BSH_Fcp1 NQRA_N Lsr2_DNA-bd Lycopene_cycl Motif Other DBs NCBI-ProteinID:  QOF76262 LinkDB All DBs Position complement(3877910..3879736) Genome browser AA seq 608 aa AA seqDB search MSEQHIKVPDIGDFDEVAVIEVLVNVGDTVKAEQSLITVESDKASMEIPSSAAGVVKSLA VKVGDKVKQGSVVLTLEVDGAAAPAPAAAAPAPAAAAPAPKAAAPAPAAAAPVAASSYGG KVDVECDVVVLGAGPGGYSAAFRAADLGLKVVLLERYATLGGVCLNVGCIPSKALLHVAS VMDEVKHFADLGVSFAAPTVDRAKLLGHKNKVVGKLTGGLTAMAKMRKVTVLRGVGNFID PYHLEVEETSGTSWDTTGKKQTVKFRNAIIAAGSQSVSLPFMPKDPRVVDSTGALEMGTD PKRMLILGGGIIGLEMGTVYSSLGARLDVVEMLDGLMQGADRDLVKVWQKMNAPRFDNIM LKTKTVGAEATKEGIKVTFEGENAPKEPQVYDLVLQAVGRSPNGKKIGAEKAGIAVSDRG FIPVDIQMRTNVPHIFAIGDIVGQPMLAHKAVHEAHVAAEVIAGEQKGDKELSSAAFNAR VIPSVAYTDPEVAWVGLTEDQAKAEGIKIKKGHFPWTASGRAIANGRDEGFTKLLFDAET HRILGGGIVGTHAGDMIGEIALAIEMGADEIDIGKTIHPHPTLGESIGMAAEVAHGTCTD LPPVKKAA NT seq 1827 nt NT seq  +upstreamnt  +downstreamnt atgagcgaacaacacatcaaggtgccggacatcggcgacttcgacgaagtcgcggtgatc gaggtgctggtcaacgtcggcgacacggtcaaggccgagcagtcgctcatcacggtcgag tcggacaaagcctcgatggaaattccgtcgtcggcagccggcgtggtgaagtcgctggct gtgaaggtcggcgacaaggtcaagcaagggtcggtcgtgctgacactcgaagtcgacggg gccgctgcgcctgcgccggctgctgcggcccccgcacctgcggctgctgcgcccgcgccc aaggcggctgcaccggctccggccgcagcggcgcccgtggcggcgtccagctacggcggc aaggtcgatgtcgagtgcgacgtggtcgtgctcggcgccggccccggcggctactcggcc gccttccgcgcggccgacctcggcctgaaggtcgtgctcctcgaacgctacgccacgctg ggcggcgtctgcctgaacgtcggctgcattccgtcgaaggcgctgctgcacgtggcatcc gtcatggacgaggtgaagcacttcgccgacctcggcgtgagcttcgccgcgcccacggtc gatcgcgccaagctgctcggccacaagaacaaggtggtgggcaagctcaccggcggcctc acggcgatggccaagatgcgcaaggtgacggtgctgcgcggcgtcggcaacttcatcgac ccgtaccacctggaagtcgaagagacgtcgggcacgagctgggacaccaccggcaagaag cagaccgtcaagttccgcaacgcgatcatcgcggccggctcgcagtcggtgagcctgccc ttcatgccgaaggacccgcgcgtggtcgactcgaccggcgcgctggagatgggcaccgac cccaagcgcatgctgatcctgggcggcggcatcatcggcctcgaaatggggaccgtgtac tcgtcgctgggcgcgcgcctggacgtggtcgaaatgctcgacggcctgatgcagggcgcc gaccgcgacctggtgaaggtctggcagaagatgaacgcgccgcgcttcgacaacatcatg ttgaagaccaagacggtcggtgccgaagccacgaaagaaggcatcaaggtcaccttcgag ggcgagaacgcgccgaaggagccgcaggtgtatgacctcgtgctgcaggccgtcggccgc agcccgaacggcaagaagatcggcgccgagaaggccggcatcgcggtgagcgaccgtggc ttcattccggtcgacatccagatgcgcaccaacgtgccgcacatcttcgccatcggcgac atcgtgggccagcccatgctggcgcacaaggcggtgcacgaggcgcacgtggcggccgaa gtgatcgctggcgagcagaagggcgacaaggagctgtccagcgccgccttcaacgcccgc gtgatcccgagcgtggcctacaccgatcccgaagtggcatgggtcggcctcaccgaagac caggccaaggccgaaggcatcaagatcaagaagggccacttcccgtggaccgcgtcgggc cgcgcgattgccaacggccgcgacgaaggcttcaccaagctgctgttcgacgccgagacg caccgcatcctgggtggcggcatcgtcggcacgcacgcgggcgacatgatcggcgagatc gcgctggccatcgagatgggcgcggacgagatcgacatcggcaagaccatccacccgcat ccgacgctgggcgaaagcatcggcatggcagcggaagtggcgcacgggacgtgtaccgac ctgccgccggtgaagaaggcggcttga

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