Variovorax sp. 38R: IG196_18065
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Entry
IG196_18065 CDS
T10235
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
vav Variovorax sp. 38R
Pathway
vav00051
Fructose and mannose metabolism
vav00541
Biosynthesis of various nucleotide sugars
vav01100
Metabolic pathways
vav01250
Biosynthesis of nucleotide sugars
Module
vav_M01016
GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
IG196_18065 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
IG196_18065 (gmd)
Enzymes [BR:
vav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
IG196_18065 (gmd)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
NmrA
Motif
Other DBs
NCBI-ProteinID:
QOF76293
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Position
3927851..3928888
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AA seq
345 aa
AA seq
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MKKRAVVTGITGQDGAYLAELLLGKGYTVYGTFRRTSSVNFWRIESLGIQDHPELHLVEY
DLTDLGSSLTLIRDAEPDEVYNLAAQSFVGASFNQPEATTHINGLGTLHLLEAIRLTNRK
IKYYQASTSEMFGKVQAIPQKEDTPFYPRSPYGVSKLFAHWMTMNYRESYGIFGCCGILF
NHESPLRGREFVTRKITDAAARIRLGMLDVLTLGNLDAKRDWGYAKEYVEGMWRMLQADK
PDNYVLATQRAETVREFVDMAFRAADCELRFEGAGQEEVAIDRKTGKVLVKIDPKFYRPA
EVELLIGDASHARKTLGWEPRTTLEELCTMMVEADLRRNREGRSF
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacgtgctgtcgtcaccggcattaccggacaagacggggcgtacctggccgag
ctgctgctcggcaagggctacaccgtctacggaaccttccgccgaaccagttcggtgaac
ttctggcgcatcgagtcgctcggcatccaggaccatccggagcttcatctcgtggagtac
gacctgacggacctgggcagttcgctcacgctgatcagggacgcggagcccgacgaggtc
tacaacctggcggcgcagagcttcgtgggcgcgagcttcaaccagcccgaagccaccacg
cacatcaacggcctgggcacccttcacctgctcgaagcgattcgcctgacgaaccgcaag
atcaagtactaccaggcctcgacgtcggagatgttcggcaaggtccaggccattccgcag
aaggaagacacgcccttctacccccgcagcccgtacggcgtctccaagctcttcgcgcac
tggatgacgatgaactaccgggagagctacgggatcttcggttgctgcggcatcctcttc
aatcacgagagcccgttgcgtggccgcgaattcgtgacgcgcaagatcaccgacgccgcg
gcgaggatcaggctcggcatgctcgatgtgctcacgctgggcaacctggacgccaagcgc
gactggggctatgcgaaggaatacgtcgagggcatgtggcgcatgctgcaggccgacaaa
ccggacaactatgtgctggccacccagcgcgcggaaaccgtgcgggagttcgtcgacatg
gcgttcagggccgcggactgcgagttgcggttcgaaggggcgggacaggaggaagtcgcc
atcgaccgaaagaccggcaaggtcctcgtgaagatcgacccgaagttctatcggcctgcc
gaagtggaactgctcatcggcgatgcgtcgcatgccaggaagacgctgggctgggagccc
cggacgacgctggaggaactgtgcacgatgatggtggaggccgacctgcggcgcaatcgc
gaaggccgttccttctga
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