Variovorax sp. 38R: IG196_18075
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Entry
IG196_18075 CDS
T10235
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vav Variovorax sp. 38R
Pathway
vav03030
DNA replication
vav03430
Mismatch repair
vav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IG196_18075 (dnaQ)
03430 Mismatch repair
IG196_18075 (dnaQ)
03440 Homologous recombination
IG196_18075 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vav03032
]
IG196_18075 (dnaQ)
03400 DNA repair and recombination proteins [BR:
vav03400
]
IG196_18075 (dnaQ)
Enzymes [BR:
vav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IG196_18075 (dnaQ)
DNA replication proteins [BR:
vav03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IG196_18075 (dnaQ)
DNA repair and recombination proteins [BR:
vav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IG196_18075 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QOF76294
LinkDB
All DBs
Position
complement(3929147..3929854)
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AA seq
235 aa
AA seq
DB search
MSRQIVLDTETTGLSAENGDRVIELGCVELFARKLTGNDLHIYFNPERESHEDALKVHGL
TTDFLRDKPKFATLGKDIIEYLRDAELIIHNAAFDVGFLNKEFERAGLPPLKTFVSEVTD
TLAMAKLVYPGKRNSLDALCDRFGVDRSNRTFHGAKLDAQLLADVYINLTRGQDALLIDV
ASNEPAQGTTVVAIDLSQFELPVIEAAEHELSAHEAVLSQLDKSSGGKTVFRQNA
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtcagatcgttcttgacaccgaaaccaccgggctctctgcggagaacggcgac
cgcgtcatcgagctgggctgcgtggagctgttcgcgcgcaagctcaccggcaacgacctg
cacatctacttcaacccggagcgcgagagccacgaggacgcgctcaaggtccacggcctg
accaccgacttcctgcgcgacaagccgaagttcgccacgctgggcaaggacatcatcgag
tacctgcgcgatgccgagctgatcatccacaacgcggccttcgacgtcggctttctcaac
aaggaattcgagcgcgccggcctgccgccgctcaagaccttcgtgagcgaagtgaccgac
acgctggccatggccaagctggtctaccccggcaagcgcaactcgctcgacgccctgtgc
gaccgcttcggtgtcgaccgctcgaaccgcaccttccacggcgccaagctcgacgcgcag
ctgcttgccgacgtctacatcaacctcacgcgcgggcaagacgcactgctgatcgacgtg
gcctcgaacgagcctgcgcagggcacgacggtcgtggccatcgacctgagccagttcgag
ctgccggtgatcgaggcggccgagcacgaactcagcgcgcacgaagcggtgttgtcgcaa
ctcgacaaatccagcggtggaaaaacggtgttccgccaaaacgcttga
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