Variovorax sp. 38R: IG196_18160
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Entry
IG196_18160 CDS
T10235
Symbol
accC
Name
(GenBank) acetyl-CoA carboxylase biotin carboxylase subunit
KO
K01965
propionyl-CoA carboxylase alpha subunit [EC:
6.4.1.3
]
Organism
vav Variovorax sp. 38R
Pathway
vav00280
Valine, leucine and isoleucine degradation
vav00630
Glyoxylate and dicarboxylate metabolism
vav00640
Propanoate metabolism
vav01100
Metabolic pathways
vav01110
Biosynthesis of secondary metabolites
vav01120
Microbial metabolism in diverse environments
vav01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IG196_18160 (accC)
00640 Propanoate metabolism
IG196_18160 (accC)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
IG196_18160 (accC)
Enzymes [BR:
vav01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.3 propionyl-CoA carboxylase
IG196_18160 (accC)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
PCC_BT
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
ATP-grasp_3
GARS_A
HlyD_3
ATPgrasp_ST
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
QOF76310
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Position
complement(3944939..3946987)
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AA seq
682 aa
AA seq
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MFKKILIANRGEIACRVIQTAKKMGILTVAVYSDADKEARHVELADEAVHIGAAPSRESY
LQADRIIAACKQTGAEAVHPGYGFLSENEAFARKVEEEGIAFIGPKHYSIAAMGDKIASK
KLANEAQVNTIPGWNDAIETAERAVEIAKDIGYPVMIKASAGGGGKGLRVAFNDKEAFEG
FTSCRNEARNSFGDDRVFIEKFVEEPRHIEIQVLGDSHGNVIYLNERECSIQRRHQKVIE
EAPSPFITDATRKAMGEQAVQLAKAVKYQSAGTVEFVVGKDQSFYFLEMNTRLQVEHPVT
ECITGLDLVELMIRVAAGEKLPLAQADVKRDGWAIECRINAEDPFRNFLPSTGRLVKFQP
PAESMFASDTGHLHGVRVDTGVYDGGEIPMYYDSMIAKLIVHGKDRTEAIALMREALNGF
VIRGISSNIPFQAALLAHPKFVAGDFNTGFIAEHYGKGFHAEDVPHADPSFLVALAAFVN
RRYRARASGITGQLAGHGVKVGEKFVVVELGPEGKHVQHAVSVSDFQDKTGASVVTVGDK
RYQIDSAFALGAARVQGTANGKPFTAQVERGAGKNPLALRVSHDGTQIETMVLSPLGARL
LELMPYKAPPDLSKFLMSPMPGLLVEVAVQPGQQVQAGEKLAVIEAMKMENVLFAAQDGV
VGKISAAKGESLAVDQIILEFN
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagaaaatcctgatcgccaaccgtggcgaaatcgcctgccgcgtcatccagact
gcgaagaagatgggcatcctcaccgtcgccgtctactccgacgccgacaaggaagcccgc
cacgtcgagctggccgacgaggccgtgcacattggcgcggcgcccagccgtgagagctat
ctgcaggccgaccgcatcatcgcggcctgcaagcagaccggcgccgaggccgtgcacccg
ggctacgggttcctgtcggagaacgaagcctttgcgcgcaaggtcgaggaagagggcatt
gccttcatcggcccgaagcactattcgatcgcggccatgggcgacaagatcgcctcgaag
aagctggcgaacgaagcccaggtcaacaccattcccggctggaacgacgccatcgagacg
gccgagcgcgccgtcgagatcgccaaggacatcggctaccccgtgatgatcaaggcctcg
gccggcggcggcggcaagggcctgcgcgtggccttcaacgacaaggaagccttcgagggc
tttacctcgtgccgcaacgaagcgcgcaactccttcggcgacgaccgcgtgttcatcgaa
aagttcgtcgaggagccgcgccacatcgagatccaggtgctgggcgattcgcacggcaac
gtgatctatctgaacgagcgcgagtgctccattcagcgccgccaccagaaggtgatcgag
gaggcgccgtcgcccttcatcaccgacgccacgcgcaaggcgatgggcgagcaggcggtg
cagctggccaaggccgtgaagtaccagagcgcgggcacggtggagttcgtggtcggcaag
gaccagagcttctacttcctggagatgaacacacgcctgcaggtggagcacccggtgacg
gagtgcatcacggggctggacctggtcgagctgatgatccgcgtggcggccggcgagaag
ctgccgctggcgcaggccgacgtgaagcgcgacggctgggccatcgagtgccgcatcaac
gccgaagacccgttccgcaacttcctgccgtcgacgggtcgcctggtgaagttccagccg
cctgccgagagcatgttcgcgagcgacaccggccacctgcacggcgtgcgcgtggacacc
ggcgtgtacgacggcggcgagatcccgatgtattacgactcgatgatcgccaagctcatc
gtgcacggcaaggaccgcaccgaggccatcgccctcatgcgcgaggcgctcaacggcttc
gtgatccgcggcatcagcagcaacatcccgttccaggcggcgctgctggcacacccgaag
ttcgtggcgggcgatttcaacaccggcttcatcgccgagcactacggcaagggcttccat
gcggaagacgtgccgcacgccgatccgtcgttcctggtggcgctggccgccttcgtcaac
cgccgctaccgcgcgcgcgcctcgggcatcaccgggcagctcgcgggtcacggtgtgaag
gtgggcgagaagttcgtggtggtcgagctgggccctgagggcaagcacgtgcagcacgcg
gtgtcggtgagcgacttccaggacaagaccggcgccagcgtcgtcacggtgggcgacaag
cgctaccagatcgacagcgcattcgcgctgggcgcagcgcgcgtgcagggcacggccaac
ggcaagccgttcacggcgcaggtggagcgcggcgcgggcaagaacccgctggcgctgcgc
gtgtcgcacgacggcacgcagatcgaaaccatggtgctgtcgccgctgggcgcgcgcctg
ctcgagctgatgccctacaaggcgccgcccgacctcagcaagttcctgatgtcgccgatg
cctggcctgctggtcgaggtggcggtgcagccggggcagcaggtccaggccggcgagaag
ctggccgtgatcgaggccatgaagatggaaaacgtgctgttcgccgcgcaggatggcgtg
gtgggcaagatctcggcggccaagggcgaatcgctcgccgtcgaccaaatcattctggag
ttcaactga
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