Variovorax sp. 38R: IG196_18760
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Entry
IG196_18760 CDS
T10235
Name
(GenBank) RHS repeat protein
Organism
vav Variovorax sp. 38R
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GFIT
Other DBs
NCBI-ProteinID:
QOF76417
UniProt:
A0A7L8S976
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Position
complement(4077353..4082164)
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AA seq
1603 aa
AA seq
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MATQGPQETKPREKQTAVAPLNAIAPQDIGAGAARFDKWLRDISNDYVTLERLSTVAGSL
PVIGNIMALIDVIMDIVLISGRFIKKEAVDFLAWVNLGINLIGIIPAPPSMAAARMSLRP
ALHLVKQQLKHSASNIGDALISVLVMHLNDKIAGEIEKFVDGAMSKLSGILNNCADKADG
VVDDLISVLRRCTGGEDLFKIAGPKPERNTYNPKKESMWNRMLAAADRYAKQAANYAVKV
AAARLPDKAKAVVNIVISSLTDFKGALRAKLMALASAETERSIMWLLKRLFAAVKKFKAK
RAAVVPPTKGTQAQATRPGHELGAVNTQAGATGSGNCCKQGAAKAKTRKSISFATGSESF
THTDFVLSATLPIEWSRTYSSDLDAYDQGGLGARWLIPYTTRIDVVESKGRRALVYRAAD
GRSHDIPWLAVGQSHRNAIEEFSATRVSDTLLVLDFGKPLPAGEPADWRESYELVDTVSS
KAATQGKQHFRLVAQHAKDGAAIGLRYDHALPSGEQVLSDVVSKQGDVTLAHVGIRPHAI
SGRIESVWELKDGQVVRQLAAYTHDEAGDLVAAQDENGAAWAYEYSHHLITRYTDRTGRG
MNLAYDGTGAQAKAIREWADDGSFDTRLEWDENIRLTYVTDALGQETWIYYDILGYTYRV
IHPDENEEWFFRDDAKNITRHVHADGTTDDYVYDDAGNLQTHTQADGSQVHFEYDKLSRL
TGVRDAEGGAWRRDYNPQGHLTEETDPLGHKTQYAYDKAGRPVQITDAKGGVKKLAYTPT
GELASYTDCSGKTTTWTYDPQGRLAQSTDAAGQVTRYRYTTLDEQTLTAAQAGANHPGQL
EEVTHPDQTSERLAHDAEGRLLTHTDALARSTHYRYADAGLIAGRTDAAGHALSYHWDQL
GRLTRLDNENRSHYLFKYDPVGRLLEETGFDGKVTRYRYEETSGVLTEVAEAGQVTRLAF
DPLGRLVEREAAAQAETFAYDGNGRLVEARNQDAKLQWFYDPAGNLTREHHADLARGHTA
IWQHRYNELNQRVGSTRPDGHTQEWLTYGSGHVHGLLLDGQDILSLERDDLHREVGRQQH
NGLAQTQTYDPAGRLLEQQITHTKPAPGTTGPTAVGIRRSYRYDKAGQLTGIGDSRRGRL
DYRYDPVGRLLEAQSQLGKEVFAFDPAGNIADPVLKEPGTATLAREQRVAPGKLLDNLLK
AYAGTSYKYDERGNLIERTKNGQKTLFNWDGFNRMVSAKSEEGTTTFRYDPMGRRIAKAS
GSRETLFGWDGDTIAYESATPLDPRAREQAHTVHYVHEKDSFVPLVQVRRQRSLQLSRTT
DVKALMQANGGAYDIEQDPLWNGQGLQQASAEPFRPEEIAFYQCDHLGTPQELTDSEGQV
CWSVSYKAWGEAKEVISEAAKQAGIANPIRFQGQYFDEETRLHYNRYRYYDPHSGRFASS
DPIGLLGGFNNHAYAANPIEWVDPFGLVNLRPTDPARGSLTTVQTRCWYLREESRIDAQL
GCCKSPKERARLAHKLRNEARIRARLLANDPKMGVGLYIGGEASATGKAEPMLKWKDAVA
KAQARGATGNDIYKSIEESSQKSRASVNKVLSGADCEKELRGL
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgcagggaccgcaggaaaccaagccgcgcgaaaagcagaccgcggtcgcgccg
ctcaacgccatcgcaccgcaggacatcggtgccggcgcggcgcgtttcgacaagtggttg
cgcgacatcagcaacgactacgtcacgctggagcgcttgagcacggtggccggcagcttg
cccgtcatcggaaacatcatggcgttgatcgacgtcatcatggacatcgtcttgatcagc
ggacgattcatcaagaaggaggccgttgattttcttgcgtgggtcaacctgggcatcaac
ctgatcggcatcattcccgcaccgccgagcatggcggctgcccgcatgagcctgcgcccg
gcactgcacctcgtcaaacagcaactcaagcacagcgcctccaacatcggcgacgcgttg
atctccgtgttggtgatgcacctcaacgacaagatcgcgggcgagatcgagaagtttgtc
gacggtgcgatgagcaagctctcgggcatcctgaacaattgcgctgacaaagccgatggc
gttgtcgacgacctcatcagcgtgttgcgccgctgcaccggcggcgaagacctgttcaag
attgcgggacccaagcccgagaggaacacctacaaccccaagaaggagagcatgtggaac
cgcatgctcgccgccgcggaccgctatgccaaacaggcggccaactacgccgtcaaggtg
gcggccgcacgcctgcccgacaaggccaaggcggtggtcaacatcgtcatcagcagcctg
accgacttcaagggcgcgctgcgagccaagttgatggcgctggccagcgccgagaccgag
cgctcgatcatgtggctgctcaagcgcctgtttgccgccgtcaagaaattcaaggccaag
cgtgccgctgtcgttccgcccaccaagggcacccaggcgcaggccaccaggccgggtcac
gaactcggcgccgtgaacacccaggctggcgccactggcagcggcaactgttgcaagcag
ggggctgccaaggccaagacccgcaagtccatcagcttcgccacaggcagcgagagcttc
acccacacggatttcgtgttgtcggccacgctgcccatcgaatggagccgcacctacagc
agcgacctcgacgcctatgaccagggcggcctcggtgcgcgctggctgatcccgtacacg
acgcgcatcgacgttgtcgaatccaagggccgacgcgcactggtctaccgtgccgccgat
ggtcgcagccatgacatcccctggctggccgtcggtcaaagccatcgcaacgccatcgag
gaattcagtgccacgcgtgtgagcgacacgctgctggtgctcgatttcggcaagccgttg
cccgccggcgaaccggccgactggcgcgagagctacgaactcgtcgacacggtcagcagc
aaagccgccacccaaggcaagcagcacttccgtctggtggctcaacatgccaaggacggc
gccgcgatcggcctgcgctacgaccatgcattgccttccggcgagcaggtgctgagcgat
gtcgtcagcaagcagggcgacgtcacgctcgcgcatgtcggcatccggccacatgcgatc
tccgggcgcatcgagtccgtctgggaactgaaagacgggcaggtcgttcgtcaactcgcc
gcctacacgcacgacgaggccggcgatctggtcgcggcgcaggacgagaacggcgccgcc
tgggcctacgagtacagccaccacctcatcacccgctacaccgaccgcaccggccgcggc
atgaacctggcctacgacggcaccggggcccaggccaaggcaattcgcgaatgggcggac
gacggcagcttcgacacccgcctggagtgggatgagaacatccgcctgacctatgtgacc
gatgcgctgggccaggaaacctggatctactacgacatcctcggctacacctaccgcgtc
attcacccggacgagaacgaggagtggttcttccgtgacgacgccaagaacatcacccgc
catgtgcacgccgacggcaccaccgacgactacgtctacgacgacgccggcaacctgcaa
acccacacccaggccgatggcagccaggtccatttcgaatacgacaagctcagccgcctg
accggcgtgcgcgatgccgaaggcggtgcctggcggcgcgattacaacccgcagggtcac
ctcaccgaggaaaccgacccgctcggccacaagacccaatacgcctacgacaaggctggg
cggccggtgcagatcaccgacgccaagggcggtgtcaaaaagctcgcctacaccccgacg
ggcgaactcgccagctacaccgactgctcgggcaagacgaccacctggacctacgaccct
caaggccgcctcgcccaaagcaccgacgccgctggccaggtcaccaggtaccgctacacc
acgctcgacgagcaaacgctgacggcggcccaggcgggtgccaatcacccgggccagctc
gaagaagtgacgcaccccgatcaaaccagcgagcgcttggcccacgacgccgaaggccgc
ctgctgacgcacaccgacgccctggcgcgaagcacccactaccgctacgccgatgcggga
ctcatcgccgggcgcactgacgctgcaggtcatgctctgagctaccactgggaccaactg
gggcgcctcactcggctcgacaacgagaaccgcagccactacctgttcaagtacgacccc
gttggccgcctgctcgaagaaactggcttcgatggcaaggtgacccggtaccgctacgaa
gaaaccagcggtgtgctcaccgaagtggccgaagcaggacaggtcacccgactcgccttc
gaccccttggggcgacttgtcgaacgcgaggccgccgcccaagccgaaaccttcgcctac
gacggcaacggccgcctcgtcgaagcccggaaccaggatgccaagctccagtggttctac
gatcccgccggcaatctcacccgcgagcaccacgccgaccttgccagggggcacaccgcc
atctggcagcaccgctacaacgaactcaatcagagagtgggcagcacccgtcccgacggc
catacccaggagtggctcacctacggcagcggccatgtgcacggcctgctgctcgacggc
caggacatcctgagcctggagcgtgacgacctgcaccgtgaagtcggccgccagcagcac
aacggcctggcccagacgcaaacctacgaccccgccgggcggctactcgagcagcagatc
actcacacgaaaccggctcctggcaccacaggccccactgccgtcggcatccgccgcagc
tatcgctacgacaaagccggccaactcaccggcatcggcgacagccggcgcgggcggctg
gactaccgctacgacccggtcgggcgattgctcgaagcccagagccaactgggcaaggaa
gtgttcgccttcgaccccgcgggcaatattgccgacccggtgctgaaggagcccggcacg
gcaacgctcgcgcgtgaacagcgcgtggcccccggcaaactgttggacaacttgctcaaa
gcgtacgccggcacgagctacaaatacgatgagcgcggcaacctcatcgagcgcacgaag
aacgggcagaagaccctcttcaactgggacggcttcaaccgcatggtcagcgccaagagc
gaggagggcaccacgaccttccgttacgacccgatgggccggcgcattgccaaggcgagc
ggatcgagagagaccctctttggttgggacggcgacaccatcgcctacgaaagcgcaacg
ccgctggaccccagggcccgggagcaggcgcacaccgtgcactacgtccacgagaaggac
agcttcgtgccgctggtgcaggtgcgcagacagcgctcccttcagctgagccgcaccacc
gacgtgaaggcgctgatgcaggccaacggcggggcctacgacatcgagcaggacccgcta
tggaacgggcagggactgcagcaagccagcgccgagccgttcaggcctgaagaaatcgct
ttctaccagtgcgaccacttgggcacgccgcaggagttgaccgactcggaaggccaggtg
tgttggagtgtgagctacaaggcttggggggaagccaaggaggttatctccgaagcggcc
aagcaggcgggcattgcgaaccccatccggtttcagggtcagtacttcgacgaagaaact
cgactgcactacaaccggtaccggtactacgatccgcattcagggcgatttgcgagcagt
gatcctattgggctattggggggatttaataatcacgcctacgctgccaatccaattgaa
tgggttgacccatttggcttggtcaacttgaggccgacagatccggctcgaggctcattg
acgaccgtccagacacgttgctggtacttgagagaagagtccagaattgatgctcaactc
ggttgttgcaaatctcccaaagaaagggcgagattggctcataaattgagaaatgaagca
agaatacgcgcccgtcttctggccaatgatccgaagatgggggtcggtttgtatatcgga
ggggaggcgtcggcaacgggtaaggcagagccgatgcttaagtggaaagatgcagttgcc
aaggcgcaggcacgcggcgcaacgggaaatgatatctacaaaagtattgaggagtcctct
cagaaatccagggcctcagtaaataaggtgttatctggtgcggattgtgaaaaagaattg
agaggtctgtga
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