Variovorax sp. 38R: IG196_18940
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Entry
IG196_18940 CDS
T10235
Name
(GenBank) TetR family transcriptional regulator
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
vav Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vav03000
]
IG196_18940
Transcription factors [BR:
vav03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
IG196_18940
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_N
TetR_C_13_2
TetR_C_13
Motif
Other DBs
NCBI-ProteinID:
QOF76449
LinkDB
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Position
complement(4123297..4123902)
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AA seq
201 aa
AA seq
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MKVTKAQAQANRAHIVETASTLFRERGYDGVGIADLMAFAGFTHGGFYKHFESKADLMAQ
AASCGFAQTAAKVDGVDAVAFVKQYLSREHRDAPGDGCTMAALCADAGRQPEAIKTAFAT
GIESVLGTLGAPFDAPQRGKQRAKARARRIALIAQVVGAIVLSRACPDDSPLADEILDAC
RSAVLSGLSPAAPGASDSPVS
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcaccaaagcgcaggcccaggcgaaccgggcgcacatcgtcgagacggcttcc
acgctgtttcgcgagcgcggctacgacggggtggggattgcggacttgatggcgttcgca
ggctttacccacggcgggttctacaagcacttcgagtccaaggccgacctgatggcgcaa
gccgcgagctgcggtttcgcgcagacggccgccaaagtcgacggcgtcgatgcggtcgcg
ttcgtcaagcagtacctgtcccgcgagcaccgcgacgcgcccggcgacggctgcacgatg
gccgcgctgtgcgccgacgccggccgccagccggaggcgatcaagacggcgtttgcgacc
ggcatcgaaagcgtgctcggcacgctgggcgccccgttcgacgcgccccaacgaggcaag
cagcgcgccaaggcacgcgcccggcggatcgccctcattgcgcaggtcgtcggtgctatc
gtgctgtcgcgggcctgtcctgacgactcgccgctcgccgatgaaatcctggacgcctgc
cgcagcgccgtcctgtcgggactttccccggcggccccgggcgcgtcggattccccggtc
agctga
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