Variovorax sp. 38R: IG196_19100
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Entry
IG196_19100 CDS
T10235
Name
(GenBank) arabinose transporter
Organism
vav Variovorax sp. 38R
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Gene cluster
GFIT
Motif
Pfam:
MFS_1
DUF6107
Motif
Other DBs
NCBI-ProteinID:
QOF76478
UniProt:
A0A7L8S986
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Position
4157993..4159198
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AA seq
401 aa
AA seq
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MTNVQNTNPSSSLRTLVWMTLALFLAYLSVAMSMPAVTLHVSQTLGMGNVASGLGVGIAF
LSTILSRGWAGRLADERGGKFAMFRGLVLYAAASLLCWASSLPVLGHGTGAYLVLLVGRL
VLGLGESFALVGMLGWAMAAMGPARSGQVMALVGTGMYGAFAVGGPLGLWLLERLGFAGL
MAGSIALPLVSGAMLWSIAPAMSAQGRRAPFSDVLGLIWKQGAVVGLQGVGFAALGAFFP
LYFLAHGWQGAGYGLTCFGVGFVLVRLLAGRLPDRIGGTQVALVSLAIEAVGQALLWLAP
HPVVAMVGALLTGMGCSMVFPAMGLEAVKRVPAHLRGTAIGGFAAFQDLAYGVTGPMAGL
IADHYGHSSVFLVGLIATVVGIGMTWRLARVSRAERVSTLA
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacgtccaaaacacaaatccttcctcttccctgcgcacgttggtctggatgacc
ctcgcgctatttctcgcctacctgtccgtcgccatgtcgatgccggcggtaacgctccac
gtgtcgcagacgctgggcatgggcaatgtggcgtccggcctgggcgtcggcattgcgttc
ctgtccaccatcctgagccgtggctgggccggtcggctggctgacgaacggggcggcaag
ttcgccatgttccggggccttgtcctctatgcggctgcatcgctgctgtgctgggcatcc
tctctgcctgtgctgggccatggcaccggcgcgtacctggttctgctggtggggcgcctc
gtgctgggcctcggcgaaagcttcgcgctcgtcggcatgctcggctgggcgatggcggcc
atgggccccgcgcgttcggggcaggtcatggcgctcgtcggcaccggcatgtatggcgcc
tttgcggtcggcggtcctctgggcctctggctgctggaaaggctcggcttcgccggcctg
atggcgggcagcatcgccttgccactggtcagcggcgcgatgctgtggtccattgcgccc
gccatgtctgcacaagggcgccgcgcaccgttctccgatgtgctgggactcatctggaag
caaggcgcggtcgtgggcttgcaaggcgtcggctttgcggccctgggcgcgttctttccc
ttgtacttcctggcccatggctggcagggtgccggttatggactgacttgcttcggcgtt
ggcttcgtcctggtgcgactgctggcgggtcgcttgcccgaccgcatcggcggcacccag
gtggcgctggtctcgttggcaatcgaggctgtgggtcaggccctgctgtggctggcgccc
catccggtcgtggccatggtgggcgcattgctgaccggcatgggctgctcgatggtgttc
cccgccatgggactggaggccgtcaagcgcgtgcccgcccatctgcgcggcaccgccatc
ggcggcttcgcggcgttccaggatctggcgtacggcgtcaccggcccgatggcggggctg
attgccgaccactacggtcactcgagtgtgtttctggtggggctgatcgcgacggttgtg
gggatcgggatgacgtggcggcttgcgagggtgtctcgcgctgagcgtgtatcgacgttg
gcttga
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