Variovorax sp. 38R: IG196_19260
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Entry
IG196_19260 CDS
T10235
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
vav Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vav03032
]
IG196_19260
03036 Chromosome and associated proteins [BR:
vav03036
]
IG196_19260
03400 DNA repair and recombination proteins [BR:
vav03400
]
IG196_19260
DNA replication proteins [BR:
vav03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
IG196_19260
Chromosome and associated proteins [BR:
vav03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
IG196_19260
DNA repair and recombination proteins [BR:
vav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
IG196_19260
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QOF81990
UniProt:
A0A7L8SRF7
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All DBs
Position
4185170..4185469
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AA seq
99 aa
AA seq
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MERVPALNKTDLVAAIAADTDLSKIDAARALDSVIDNLSRALARGDTVQLIGFGTFTVSD
RPERSGRNPSTGEPMTIKASKAPKFSAGKALKDAVNVAS
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
attgaaagagtccccgccttgaacaagaccgacctcgttgcagccattgccgcagacacc
gacctcagcaagatcgatgctgcccgcgcacttgattccgtcatcgacaacctctcccgc
gcgctggcacgcggcgacaccgtgcagctgatcggcttcggcaccttcacggtgtcggac
cgccccgagcgctccggccgcaacccgtcgacgggcgagcccatgaccatcaaggccagc
aaggcgccaaagttctccgcaggcaaggccctgaaggacgcagtcaacgtcgccagctga
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