Variovorax sp. 38R: IG196_19870
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Entry
IG196_19870 CDS
T10235
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vav Variovorax sp. 38R
Pathway
vav02010
ABC transporters
vav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IG196_19870
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IG196_19870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_19870
Transporters [BR:
vav02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
IG196_19870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
QOF76614
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All DBs
Position
complement(4314231..4315430)
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AA seq
399 aa
AA seq
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MKNQLTAFALAFTALALAASAQAQGQDKVKIGFITDMSSLYADLEGKNGALAIQMAIDDF
GGKAAGKPVELLTVDHQNKPDIAASKAREWIDTQGLSMVFGGTNSGVGLALAKVAAEKKR
VYFNNGAASSVLTNEQCSPYTVHYAYDTVALAKGTGAAVVDGGGKTWFFLTADYAFGHAL
EADTSTVVKAKGGTIVGAVRHPLNASDFSSFLLQAQNSKAQILGLANAGGDTVNSIKAAK
EFGIGKTMKLAGLLIFLSDVHSLGLKNTEGLQFTTSWYWDLNDDTRKFAKRFFDKTKRMP
TEIQAADYSATMTYLKAVDAAKTDDADKVMAELKKMKINDFFGSGQIRPDGRYVHDMYLM
QVKSPAESKTPWDYYKLVKKLPGDTVFTTKADSKCALWK
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcagctcaccgctttcgccctggctttcaccgcactggcgctcgcagcgtcc
gcccaggcgcaaggccaggacaaggtcaagatcggcttcatcaccgacatgtcgagcctg
tacgccgacctcgaaggcaagaacggcgcgctggcgatccagatggccatcgacgacttc
ggcggcaaggccgccggcaagccggtcgagctgctcaccgtcgaccaccagaacaagccc
gacatcgccgcctcgaaggcgcgcgagtggatcgacacgcaaggcctgagcatggtcttc
ggcggcaccaattcgggtgtcggcctggcgctggccaaggtcgcggccgagaagaagcgc
gtgtacttcaacaacggcgcggcctcgtcggtgctcaccaatgaacagtgctcgccctac
accgtgcactacgcctacgacaccgtcgcgctcgccaagggcaccggcgccgcagtggtc
gacggcggcggcaagacctggttcttcctgacggccgactacgccttcggccacgcactc
gaagccgacacctccaccgtcgtgaaggccaagggcggcacgatcgtcggcgcggtgcgc
cacccgctcaacgcgtccgacttctcctcgttcctgctgcaggcgcagaactccaaggcg
cagatcctcggcctggccaatgcaggcggcgacaccgtcaacagcatcaaggcggcgaaa
gaattcggcatcggcaagaccatgaagctggccggcctgctgatattcttgagcgacgtg
cacagcctgggcctgaagaacaccgaaggcctgcagttcaccaccagctggtactgggac
ctgaacgacgacacgcgcaagttcgccaagcgcttcttcgacaagaccaagcgcatgccc
accgaaatccaggccgccgactactcggccaccatgacctacctcaaggccgtggacgcc
gccaagaccgacgatgccgacaaggtcatggccgagctcaagaagatgaagatcaacgac
ttcttcggctccggccagatccgtcccgacggccgctacgtgcacgacatgtacctgatg
caggtcaagtcgcccgccgaatcgaagacgccgtgggactactacaagctcgtgaagaag
ctgcccggcgacacggtgttcaccaccaaggccgattccaagtgcgcgctctggaagtga
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