Variovorax sp. 38R: IG196_20045
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Entry
IG196_20045 CDS
T10235
Name
(GenBank) branched-chain amino acid ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vav Variovorax sp. 38R
Pathway
vav02010
ABC transporters
vav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IG196_20045
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IG196_20045
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_20045
Transporters [BR:
vav02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
IG196_20045
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
Gcn1_N
Motif
Other DBs
NCBI-ProteinID:
QOF76647
LinkDB
All DBs
Position
complement(4349888..4351171)
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AA seq
427 aa
AA seq
DB search
MKTPFIWRRQALKFAAAALCATPFAGFAQAPPPAPIRLALIESMSGPFANTGEAVFRNLL
WAVERVNARGGVKLPGGARPLQLDRYDSKGQNEEALSALRAAMDDGTRIVLQGNSSVTAA
ALIDAIDKNNERDPSRRAIFLNYSAVDPVLTNERCSFWHFRFDAHADMRVAALMDVVKDD
AALKRVYLIGQDYSFGQAVLRESRRQLGAQRPDVEIVGDELHPMGKVKDFAPYATKILAS
GAQAVVTGNWGNDLTLLVKAAREAGFNGTFYTFYGNALGAPAAIGDAGIGRVVAVADWLP
NVQTPQSEAFYRAFRTRFPRPADDYVHMRMQLLVESLAQALERAGNTEAVPLARALEQAD
VSLYGQRGRMRAADHQFQQQLVVGVMDKQGKPGVQFDVEGSGYGFRVIKTIAPERAEQPT
SCKMKRP
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccccctttatttggcgccgccaggccttgaaattcgcagcggcggcgctatgc
gcgaccccgttcgccggcttcgcgcaggccccgccacccgcccccatccggctggcgctc
atcgagagcatgagcggcccgtttgccaacaccggcgaggccgtgtttcgcaacctgctg
tgggcggtggagcgcgtgaatgcacgcggcggtgtgaagctgccgggcggcgcgcggccg
ctgcagctcgaccgctacgacagcaagggccagaacgaagaggcgctctccgcgctgcgc
gcggccatggacgatggcacccgcatcgtgctgcagggcaactcgtcggtgacggcggcg
gcactgatcgatgccatcgacaagaacaacgagcgcgacccgtcgcggcgcgcgatcttc
ctgaactactcggcggtcgatccggtgctgaccaacgagcgttgcagcttctggcacttc
cgcttcgacgcccatgccgacatgcgcgtggccgcgctgatggatgtggtcaaggacgat
gcggcgctcaagcgcgtctacctgatcggccaggactacagcttcggccaggccgtactg
cgcgaatcgcgccgccagctcggcgcgcagcgccccgacgtggagatcgtcggcgacgag
ctgcacccgatgggcaaggtgaaggacttcgcgccctacgccaccaagatcctcgccagc
ggcgcgcaggccgtggtcaccggcaactggggcaacgacctcacgctgctcgtgaaggct
gcgcgcgaagccggtttcaacggcaccttctacaccttctacggcaacgcactgggcgcg
cccgccgccatcggcgacgcgggcatcggccgcgtggtcgccgtggccgactggctgccg
aacgtgcagacgccgcagtccgaagccttctaccgcgcgttccgcacgcgctttccgcgg
ccggccgacgactacgtgcacatgcgcatgcagttgctggtcgagtcgctcgcgcaggcg
ctggaacgcgcgggcaacaccgaggccgtgccgctggcgcgtgcgctggagcaggccgac
gtgagcctgtacggccagcgcggccgcatgcgcgcggcggaccatcagttccagcagcag
ctcgtggtgggcgtgatggacaagcagggcaagcccggcgtgcagttcgacgtcgagggc
tcgggctacggcttccgcgtgatcaagacgatcgcgcccgagcgcgccgagcagcccacc
tcctgcaagatgaagcgcccttga
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