Variovorax sp. 38R: IG196_20170
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Entry
IG196_20170 CDS
T10235
Name
(GenBank) SDR family oxidoreductase
KO
K01784
UDP-glucose 4-epimerase [EC:
5.1.3.2
]
Organism
vav Variovorax sp. 38R
Pathway
vav00052
Galactose metabolism
vav00520
Amino sugar and nucleotide sugar metabolism
vav01100
Metabolic pathways
vav01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
IG196_20170
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
IG196_20170
Enzymes [BR:
vav01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.2 UDP-glucose 4-epimerase
IG196_20170
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Motif
Pfam:
Epimerase
3Beta_HSD
GDP_Man_Dehyd
RmlD_sub_bind
NAD_binding_10
NAD_binding_4
Polysacc_synt_2
KR
NmrA
adh_short
Motif
Other DBs
NCBI-ProteinID:
QOF76669
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Position
complement(4377606..4378604)
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AA seq
332 aa
AA seq
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MSEVWKAHAQRVLVTGGDGFLGRSVLAALAAQGTFETLVALDVREVPAARRLPGVVYLQQ
DVRDDGIADVLAAHAIDTVVHLASIVTPGKDSNRAFEHSVDVGGTRNVLEACVARGVGHI
VVSSSGAAYGYHADNPAWITESQPLRGNPVFAYADHKRQVEEMLADCRTQHPALAQTVLR
IGTILGERVDNQITALFEKKRLIAIRGSDSPFVFVWDEDVTGAIAHALGGAPSGCYNLAG
DGALTIHEIAARLGKRAIAWPAGVLQAALAAGSALGVSRYGPEQLDFLRYRPVLLNTALK
TQFGYVPRKTSSEAFEAFVAARAQQGRPVTSA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagtgtggaaggcgcacgcgcagcgcgtgctggtcaccggcggtgatggtttt
ctcgggcgcagtgtgctcgccgcattggccgcgcaaggcacgttcgaaaccctggtggca
ctcgacgtgcgcgaggtgcccgccgcgcggcgactgcccggcgtggtctacctgcagcag
gacgtgcgcgacgacggcatcgccgacgtgctcgccgcgcacgcgatcgacacggtggtg
cacctcgcgtcgatcgtcacgcccggcaaggactcgaaccgcgccttcgagcattcggtg
gacgtgggcggcacgcgcaacgtgctcgaagcctgcgtggcgcgcggcgtgggccacatc
gtggtgtcgtcgagcggcgcggcctacggctaccacgcggacaacccggcctggatcacc
gagtcgcagccgctgcgcggcaacccggtgttcgcctatgccgaccacaagcggcaggtg
gaagagatgctggccgactgtcgcacgcaacatcccgcgctggcgcagacggtgctgcgc
atcggcaccatcctcggcgagcgcgtcgacaaccagatcaccgcgctgttcgagaagaaa
cggctgatcgccatccgcggcagcgacagccctttcgtgttcgtgtgggacgaagacgtg
accggcgccatcgcccatgcgctcggcggcgcaccgtccggttgctacaacctcgcgggc
gacggtgcgctcacgatccacgagattgccgcgcgcctgggcaagcgcgccatcgcctgg
ccggccggcgtgctgcaggcggcgctggccgcgggctcggcattgggcgtgagccgctac
gggcccgagcagctcgactttctgcgctaccggccggtgctgctgaacaccgcgctgaag
acccagttcggatacgtgccgcgcaagaccagcagcgaggccttcgaggctttcgttgcg
gcgcgcgcgcagcaggggcggccggtcacttccgcgtag
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