Variovorax sp. 38R: IG196_20250
Help
Entry
IG196_20250 CDS
T10235
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K15727
membrane fusion protein, heavy metal efflux system
Organism
vav Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_20250
Transporters [BR:
vav02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
IG196_20250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Zip
TrAA12
OEP
Motif
Other DBs
NCBI-ProteinID:
QOF76685
UniProt:
A0A7L8SB88
LinkDB
All DBs
Position
complement(4396240..4397622)
Genome browser
AA seq
460 aa
AA seq
DB search
MTTPHNRTTSSGRKQWIAIAAVLLAGLIAGALILRTAPSKPAGDGHSESAGHADGEHHEE
DKGHAKGKEDDHGHSHDEGHGDKEHHAEEGKDAGKEAGKEAPATAEPQKAAANAHKEDEE
KIPFTDEQVKAAGIAIDSVGPARIKTSLQLPGEIKFNEDRTAHVVPRVAGVVDSVSANLG
QEVKRGQVLAVISSPALSEQRSELQTAQRRLALARTTHDREKKLWEEKISPQQDYLQAEQ
AMQEAQIAVANANQKLLALGATPGSSALGRYELRAPFDGMVVEKHISLGESVGEAVNVFT
ISDLSTVWAEISVPASSLNLVRVGEAVTIRAGSFEQAARGTVSYVGSLLGAQTRTATARV
TLTNPQRTWRPGLFVNVELVASEADAPVTVSAEAVQTVDDQPTVFLRVPGGFVPQHVKTG
RSDGQRIEIVGGLKPGAAYAASGSFVVKSQQGKSSATHTH
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaccacacaaccgcaccacttcctccggccgcaagcagtggatcgccattgcc
gccgtgctgctcgccggcctcatcgccggcgcactcatcctgcgcaccgcgccgtccaag
cccgcgggggacggccactcggagtccgccggccatgccgacggcgagcaccacgaggaa
gacaagggccacgccaagggcaaggaagacgaccacggccattcgcacgacgaaggccat
ggcgacaaggaacaccacgcggaagagggcaaggacgccggcaaggaagcaggcaaggaa
gcccctgccaccgcagagccgcagaaagccgccgccaacgcccacaaggaagacgaagaa
aagatccccttcaccgacgagcaggtcaaggccgcgggcatcgcgatcgacagcgtcggc
ccggcgcgcatcaagacctcgctgcagctgcccggcgagatcaagttcaacgaagaccgc
acggcccacgtggtgccgcgcgtggcgggtgtggtcgacagcgtgtcggccaacctgggc
caggaagtgaagcgcgggcaggtgctggccgtgatctccagccccgcgctctcggagcag
cgcagcgaactgcagacggcgcagcgccggctggcgctggcgcgcaccacccacgaccgc
gagaagaaactgtgggaagaaaagatctccccacagcaggactacctgcaggccgagcag
gccatgcaggaggcgcagatcgccgtggccaacgccaaccagaagctgctggcgctgggc
gccacgcccggctcgtcggcactgggtcgctacgagctgcgcgcccccttcgacggcatg
gtcgtcgagaagcacatctcgctcggcgaatcggtgggcgaggcggtcaacgtgttcacc
atttccgacctgtcgaccgtgtgggccgagatcagcgtgccggccagcagcctgaacctc
gtgcgcgtcggcgaggccgtgaccatccgcgccggttccttcgagcaggccgcgcgcggc
accgtgtcgtacgtgggctcgctgctgggggcgcagacgcgcactgccaccgcgcgcgtc
acgctcaccaacccgcagcgcacctggcgcccgggcctgttcgtgaatgtggagctggtg
gcgtcggaggccgatgcgcccgtcaccgtgtcggccgaagcggtgcagaccgtggacgac
cagcccaccgtgttcctgcgcgtgcccggcggctttgtgccgcagcacgtgaagaccggc
cgcagcgacggccagcgcatcgagatcgtgggcggcctgaagcccggcgcggcctatgcg
gccagcggcagcttcgtcgtgaagtcgcagcagggcaagagctcggcaacgcatacgcat
tga
DBGET
integrated database retrieval system
