KEGG   Variovorax sp. 38R: IG196_20465
Entry
IG196_20465       CDS       T10235                                 
Name
(GenBank) HlyD family efflux transporter periplasmic adaptor subunit
  KO
K12542  membrane fusion protein, adhesin transport system
Organism
vav  Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:vav00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vav02000]
    IG196_20465
   02044 Secretion system [BR:vav02044]
    IG196_20465
Transporters [BR:vav02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   IG196_20465
Secretion system [BR:vav02044]
 Type I secretion system
  Adhesin protein transporter
   IG196_20465
SSDB
Motif
Pfam: Beta-barrel_AprE HH_AprE BSH_CusB BSH_RND BSH_YknX BSH_Fcp1 BSH_CzcB Biotin_lipoyl BSH_YhbJ CCDC39 Peptidase_M23 BSH_LcnD Beta-barrel_YknX NOMO_8th
Other DBs
NCBI-ProteinID: QOF76724
LinkDB
Position
complement(4437072..4438319)
AA seq 415 aa
MNTVTLTNKAQVQVPTAPAVSTATVWGPGGADDFDEARASGSARVVWFVALFLLAFFVWA
WCFEIDEVSSGMGKVIPSSREQRIQSLEGGILAELRVHEGQIVEKGQVLAQLDPTRGESS
VEETAARYRAALASSVRLRAEVEGRSSLQFPGELKAHAQLVDSESALFRSRQGSLRDTTA
GLGQALSLVRKELDITRSLQVSGAASNVELIRLQRQAADLELKISEARSNYMVRSREELA
KADAEVKSLSSVVRGRADSLERLTLNSPVRGIVKSLQVTTIGGVVPPNGSLLTLVPLDDQ
LLVEARISPRDIAFMRPGQEAQIKITAYDYAVYGGLKGRVVTIAPDTQRDEVKPEIVYYP
VLVRTDSDALTDKAGRRMPIVPGMVTTADIRTGRKTVWDYLTKPLNKAREAMRER
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgaacaccgtgacattgaccaacaaggcacaagtgcaagtgccgaccgcacctgctgta
tccaccgccaccgtgtggggccccggcggcgccgacgacttcgacgaggcccgcgccagc
ggctccgcacgcgtcgtctggttcgtcgcgctctttctgctcgcgttcttcgtgtgggcc
tggtgcttcgagatcgacgaggtgtccagcggcatgggcaaggtgattcccagctcgcgc
gagcagcgcatccagtcgctcgaaggcggcatccttgccgagctgcgtgtgcacgaaggc
cagatcgtcgagaagggccaggtgctcgcacagctcgacccgacgcgcggcgaatcgagc
gtggaagaaaccgccgcgcgctaccgcgccgcactggccagcagcgtgcgcctgcgcgcc
gaggtggaagggcgcagcagcctgcagttccctggcgagctgaaggcacacgcgcaactg
gtcgactccgaaagcgcgctcttccgctcgcggcagggcagcttgcgcgacaccacggcc
ggcctgggccaggcgctttcgctcgtgcgcaaagagctcgacatcacgcgctcgctgcag
gtgagcggcgcggccagcaacgttgaactcatccgcctgcagcgccaggccgccgacctg
gagctgaagatttccgaggcgcgatcgaactacatggtgcgcagccgcgaagaactcgcc
aaggccgatgccgaggtgaaatctttgtcgtccgtggtgcgtgggcgtgccgactcgctc
gagcggctcacgctcaactcgcccgtgcgcggcatcgtcaagagcttgcaggtcaccacc
atcggcggcgtcgtgccgcccaacggctcgctgctgacgctcgtgccgctggacgaccag
ttgctggtcgaggcgcgtatttcgccgcgcgacatcgccttcatgcggcccgggcaggag
gcgcagatcaagatcaccgcctacgactacgcggtgtacggcggccttaagggccgcgtc
gtgaccatcgcgcccgacacccagcgcgacgaggtcaagcccgagatcgtgtactacccc
gtgctcgtgcgcaccgactccgacgcgctcaccgacaaggccggccgccgcatgcccatc
gtgcccggcatggtgaccaccgccgacatccgcaccggccgcaagaccgtgtgggactac
ctgaccaagccgctgaacaaggcgcgcgaagccatgcgtgagcgctga

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