KEGG   Variovorax sp. 38R: IG196_20475
Entry
IG196_20475       CDS       T10235                                 
Name
(GenBank) TolC family outer membrane protein
  KO
K12543  outer membrane protein, adhesin transport system
Organism
vav  Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:vav00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vav02000]
    IG196_20475
   02044 Secretion system [BR:vav02044]
    IG196_20475
Transporters [BR:vav02000]
 Other transporters
  Pores ion channels [TC:1]
   IG196_20475
Secretion system [BR:vav02044]
 Type I secretion system
  Adhesin protein transporter
   IG196_20475
SSDB
Motif
Pfam: OEP Germane
Other DBs
NCBI-ProteinID: QOF76726
LinkDB
Position
complement(4440505..4441839)
AA seq 444 aa
MFASRHLPSAAAGLFFLLAGTAALAQASAANPLGMTEAVRLAATSHPTVRNAVGQALQAG
EGIAAARSGYYPQVSAGLSARTGNRQLQTDGRRQVHQASLSVTQLLYDFGKVSSAVNEAE
ASATAARAKLLVAVDDVVRDTAQAWIEVHRQQALGEIAQAQVKGVQSLAGLVGERQAKGA
TSQSDVAQAQSRLEAARAQQLNTASQAERWRLNLMHLTQGRAPADIAGEASAPLASACAA
HPQTALPAPTVQMAQAERDMAQAALRGADAQLLPTLSLNAGVNRGLESGARLAGQPATES
TLTVNFSAPLYEGGRSQARQRAAAHAVEAAEAALGYAQLSVRQRLEDARVQSQGHAQRLP
VLAARVHSTQRTRDLYREQYLQLGTRSLLDLLNAEQEFHGARFEQAESAHEVQRLAVECL
YQSGRLREAFGLVDAGDLVAGGQP
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgtttgcttcccgtcatctcccgtccgcagccgcgggccttttcttcctgctcgccggc
acggcggcactcgcgcaagcgagcgccgccaacccgctgggcatgaccgaggccgtgcgc
ctggccgccacctcgcacccgaccgtgcgcaacgcggtcgggcaggccctgcaggcgggc
gagggcattgcggccgcgcgctcgggctactacccgcaggtcagcgccggcctcagcgcg
cgcacgggcaaccgccagctccagaccgacggtcgccgccaggtgcaccaggcctcgctg
tcggtcacccagctgctgtacgacttcggcaaggtgtcgagcgccgtgaacgaggctgag
gcttcggccacggccgcgcgcgccaagctgctcgtggcggtcgacgacgtggtgcgcgac
accgcgcaggcatggatcgaagtgcatcgccagcaggcgctcggcgagattgcgcaggcc
caggtgaagggcgtgcagtcgctggccggcctggtgggcgagcgccaggccaagggcgcg
accagccagtccgacgtggcgcaggcgcagtcgcgcctggaggccgcacgtgcccagcaa
ctcaacaccgcgtcgcaggccgagcgctggcgcctcaacctcatgcatctgacccagggc
cgcgcaccggccgacatcgccggcgaagcgtcggcgccgctcgcgagcgcctgcgccgcg
cacccgcagacggccttgcccgcaccgaccgtgcagatggcgcaggccgagcgcgacatg
gcacaggccgcgctgcgcggtgccgatgcgcaactgctgcccacgctgtcgctgaacgcc
ggcgtcaaccgggggctcgaatcgggcgcgcggctcgccggccagcccgccaccgaaagc
acgctcaccgtcaacttcagcgcgccgctgtacgaaggcgggcgcagccaggcccgccag
cgcgccgccgcgcacgccgtcgaagcggccgaggccgcgctgggctatgcacagctcagc
gtgcggcagcggctcgaagacgcgcgcgtgcaatcgcaaggccacgcgcagcgcctgccc
gtgctcgccgcgcgcgtgcacagcacgcagcgcacgcgcgacctgtaccgcgagcagtac
ctgcagctgggcacgcgctcgctgctcgacctgctcaatgccgagcaggagtttcacggc
gcgcgcttcgagcaggccgagagcgcgcacgaagtgcagcgcctcgcggtcgagtgcctg
taccagtcgggccgcctgcgcgaggccttcgggctggtcgacgcaggcgacctcgtcgcc
ggaggccagccatga

DBGET integrated database retrieval system