Variovorax sp. 38R: IG196_20700
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Entry
IG196_20700 CDS
T10235
Name
(GenBank) efflux RND transporter permease subunit
KO
K07788
multidrug efflux pump
Organism
vav Variovorax sp. 38R
Pathway
vav02020
Two-component system
Brite
Transporters [BR:
vav02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
IG196_20700
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Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QOF76770
UniProt:
A0A7L8SBA7
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Position
complement(4496783..4499905)
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AA seq
1040 aa
AA seq
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MSPSRPFILRPVATSLLMLAIVLAGLVAFRFLPLAALPQVDYPTIQVQTLYPGASPEVMS
NTVTAPLERQFGQMSGLDRMSSTSAAGVSIITLQFSLGQTLDVAEQEVQAAINAGGSLLP
ADLPAPPVYAKVNPADAPVLTLAITSDTLPLTEVQNLVNTRLAQKISQVSGVGLVSLSGG
QRPAVRIQANTQALAANGIGLDSLRTAISAANSNGAKGSFDGPKRAYTINSNDQLLTVDD
YKNLIVSYKNGAPIRMVDVARVVNSAENAQLGAWSGRKVDGQVQLTPAIILNVQRQPGAN
VIATVNAIKKQLPELQAGLPAGLQIEVLSDRTAGIRSSVQHVEMELVLAVVLVVLVIFAF
LGSLRATVIASIAVPISLIGSFGLMYLLGYSLNNLSLMALTIATGFVVDDAIVMIENIAR
YIEEGEKPLQAAFKGAAQIGFTIISLTVSLIAVLIPLLFMGDVVGRLFREFAVTLAITIL
ISGVVSLTLVPMMSARWLKHEPKKDATGTGFGARAQRFFDGVMVRYDRSLHWVIAHQPLT
LLVALLTMVLTVVLYLTIPKGLFPTQDTGQLQARVQAAQDVSFERMAQLQQQAARAILED
PDVENLSSFVGVDAANNTMLHTGSMLINLTKSHDNQQEVMDRLRDRVRQVAGLTLYLQPT
QDLTIDAETGPTEYRVSLEGVNSALVTEWMQKLVAKLQESDKVRNVSSDAGAQGLAAYVN
VNRDTASRLSITASSVDDALYSAFGQRIVSTIFTETNQYRVILEAQPGMVNTPQTLGQLN
LIAGSGTATPLSAFAEISERQAPLQITHVAQYPASTLNFDTAPGVSLGGSVAAIRAAAKE
IGLPSSVTMTFLGASGAYEKSLSNQLWLILAAVVCVYIVLGVLYESYVHPLTILSTLPSA
GVGALLALMITGNDLGVIGIIGIILLIGIVKKNAIMMIDFAIDAERTQGKSAREAIHQAA
LLRFRPILMTTLAALFAAVPLMLSFGDGAELRRPLGLAIFGGLIVSQLLTLFTTPVIYLA
FDRLGGGARRSSAELEEETV
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgtcgcgcccgttcatcctgcggccggtcgccacctcgctgctgatgttggcc
atcgtgctggccggcctggtggcgttccgcttcttgccgctggcggcgctgccgcaggtc
gactacccgaccatccaggtccagacgctctaccccggggccagccccgaggtcatgagc
aacaccgtcactgcgccgctggagcgccagttcggtcagatgtcggggctcgaccgcatg
agctcgaccagcgcggcgggcgtgtcgatcatcacgctacagttttcgctgggccagacg
ctcgacgtcgccgagcaggaagtgcaggccgccatcaacgccggcggttcgctgctgccg
gccgacctgcccgcgccgccggtgtatgccaaggtcaacccggctgatgcgccggtgctc
acgctggccatcacgtcggacacgctgccgctcaccgaggtgcagaacctcgtgaacacc
cggctcgcgcagaagatcagccaggtctcgggcgtgggcctcgtgtcgctcagcggcggg
caacgcccggccgtgcgcatccaggccaacacgcaggcgctggcggccaacggcatcggg
ctggattcgctgcgcaccgccatcagcgcggccaactccaacggcgccaagggcagcttc
gacggccccaagcgcgcctacaccatcaactcgaacgaccagctgctcacggtcgacgac
tacaagaacctcatcgtcagctacaagaacggcgcgccgatccgcatggtcgacgtggcg
cgtgtggtcaacagcgccgagaacgcccagctcggtgcctggtccggtcgcaaggtcgac
gggcaggtgcagctcacgcccgccatcatcctgaacgtgcagcgccagcccggcgccaac
gtgatcgcgactgtcaacgccatcaagaagcagctgcccgaactgcaggccggcctgccc
gcgggcctgcagatcgaggtgctgagcgaccgcaccgccggcatccgctcgtcggtgcag
cacgtcgaaatggaactggtgctggccgtggtgctcgtggtgctggtgatctttgcgttc
ctgggcagcctgcgcgccaccgtcatcgccagcatcgccgtgccgatctcgctgatcggc
agcttcggcctgatgtacttgctgggctacagcctgaacaacctgagcctgatggcgctg
accatcgccaccggcttcgtggtggacgacgcgatcgtcatgatcgagaacatcgcgcgc
tacatcgaggaaggcgaaaagccgctgcaggccgcgttcaagggcgccgcgcagatcggc
ttcacgatcatctcgctgaccgtgtcgctcatcgccgtgctgatcccgttgctgttcatg
ggcgacgtggtgggccgcctgttccgcgagttcgccgtgacgctggcgatcaccatcctg
atctcgggcgtggtgtcgctcacgctggtgccgatgatgtcggcgcgctggctcaagcac
gagccgaagaaggacgcgacgggcaccggcttcggcgcgcgcgcccagcgtttcttcgac
ggcgtgatggtgcgctacgaccgctcgctgcactgggtgatcgcccaccagccgctcacg
ctgttggtggcgctgctcaccatggtgctgaccgtggtgctgtacctcacgattcccaag
ggcctgttccccacgcaggacaccggccagctgcaggcccgcgtgcaggccgcgcaagac
gtgtctttcgagcgcatggcgcagctgcagcagcaggccgcgcgcgccattcttgaagac
cccgacgtcgagaacctcagctccttcgtcggtgtggacgcggccaacaacacgatgttg
cacaccggcagcatgctcatcaacctgacgaagagccacgacaaccagcaggaggtgatg
gaccgcctgcgcgatcgcgtgcggcaggtggccggcctcacgctgtacctgcagcccacg
caagacctgaccatcgatgccgagaccggaccgaccgagtaccgcgtgtcgctggaaggc
gtgaacagcgcgctcgtcaccgagtggatgcagaagctggtggcgaagctgcaggagtcg
gacaaggtgcgcaacgtgagcagcgatgccggcgcgcaaggcctggccgcgtatgtgaac
gtgaaccgcgacacggcctcgcggctgtcgatcactgcgagttcggtggacgatgcactg
tacagcgccttcggccagcgcatcgtgtcgaccatttttacggagacgaaccagtaccgc
gtgattctggaagcgcagcccggcatggtgaacacgccgcagacgctggggcagttgaac
ctcattgcggggtcgggcacggcgacgccgctgtcggcttttgcggagatcagcgagcgg
caggcgccgttgcagatcacgcacgtggcgcagtatccggcgagtacgttgaacttcgat
acggcgccgggggtttctttgggtgggtcggtggcggcgattcgcgcggctgcgaaagag
atcgggttgccgagcagcgtgacgatgacttttctgggggcttcgggggcctatgaaaag
tcgttgtcgaatcagctgtggttgattctggcggcggtggtttgcgtgtacatcgtgctg
ggggtgctgtacgagagctatgtgcatccgttgacgattttgtctacgttgccttctgct
ggggtcggtgccttgttggcgctgatgattactggcaatgatctgggggtgattgggatc
atcgggatcatcttgctgatcggcatcgtgaagaagaacgcgatcatgatgatcgacttt
gctatcgatgctgaacggactcaagggaagtcggcgcgggaggcgattcatcaggctgct
ctgttgcggtttcgtcctatcttgatgactacgctggcggctttgtttgctgctgtgcct
ttgatgttgagttttggggatggggctgagttgaggcgtcctctggggcttgcgattttt
ggtgggttgatcgttagtcagttgctgactttgtttactacgccggttatttatttggcg
tttgatcggttggggggaggggctcgtcggtcttctgctgagcttgaggaggagacggtt
tga
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