Variovorax sp. 38R: IG196_21085
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Entry
IG196_21085 CDS
T10235
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
vav Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vav03000
]
IG196_21085
Transcription factors [BR:
vav03000
]
Prokaryotic type
Helix-turn-helix
LacI family
IG196_21085
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
CoA_binding_2
Sigma54_DBD
HTH_IclR
HTH_38
HTH_Tnp_ISL3
HTH_3
HTH_AraC
TetR_N
HTH_31
Motif
Other DBs
NCBI-ProteinID:
QOF76844
UniProt:
A0A7L8SAI5
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Position
complement(4571734..4572765)
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AA seq
343 aa
AA seq
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MSAQPSSSPVTIRDVARAAGVHVSTVSRALSPEKRSLISDEVLRVVEEAAQRLGYRPNRA
ASALRTGRTHTIGVLVPDITNAVFPPILQGIEASAAARGYFVFVTNVVDPALARPVLERM
LAQRVDGVILATATRDDPLVDFVAKAGMKSVLVNRADETGRLPAVVSDDRLAMKLAVDHL
VGLGHKRIAHLAGPQNIPTGVGRLLGVEQALRDHRMKPARIVECTSYSREAGAVAMKQML
AAGAAPQAVVCCNDLVALGAYDALREAGLRVPKDISVTGHNDMPLVDMVDPPLTTIRLPH
RELGWRAAEMLFAEIDGQALSASTVVLRPELVVRKSTGAPAAR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctcagccgtcttccagccccgtcaccatccgcgacgtcgcccgcgccgccggc
gtgcacgtgtcgaccgtgtcgcgcgcgctcagccccgagaagcgctcgctgatcagcgac
gaggtgctgcgtgtggtcgaagaggccgcgcagcgactgggctaccggcccaaccgcgcc
gcctcggcgctgcgcacgggccgcacccacaccatcggcgtgctggtgcccgacatcacc
aacgcggtgttcccgccgatcctgcaaggcatcgaggccagcgcggctgcgcgcggctac
ttcgtgttcgtcaccaacgtggtcgacccggcgctcgcgcggccggtgctcgagcgcatg
ctggcgcagcgtgtggacggcgtgatcctggccaccgccacgcgcgacgatccgctggtc
gacttcgtcgccaaggccggcatgaagtccgtgctggtcaaccgcgccgacgaaaccggt
cgcctgcccgccgtggtgagcgacgaccggctggcaatgaagctcgcggtcgatcacctc
gtgggcctgggccacaagcgcatcgcgcaccttgcggggccgcagaacatcccgaccggc
gtgggccgcctgctcggcgtggagcaggccttgcgcgaccaccgcatgaagccggcccgc
atcgtcgagtgcacaagctacagccgcgaggcgggcgcggtcgcgatgaagcagatgctt
gcggccggtgccgcgccgcaggccgtggtctgttgcaacgacctcgtggcactgggcgcc
tacgacgcgctgcgcgaggccggcctgcgcgtgccgaaagacatctcggtcacgggccac
aacgacatgccgctggtggacatggtcgatccgccgctcaccaccatccgcctgccgcac
cgcgaactcggctggcgcgcggccgaaatgctgttcgccgaaatcgacgggcaggcgctg
tcggcctccactgtggtgctgcgcccggagctggtggtgcgcaagtcgacgggcgcaccc
gccgcgcgctga
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