Variovorax sp. 38R: IG196_21335 Help Entry IG196_21335       CDS       T10235                                  Name (GenBank) DEAD/DEAH box helicase   KO K11927   ATP-dependent RNA helicase RhlE [EC:5.6.2.7] Organism vav  Variovorax sp. 38R Pathway vav03018   RNA degradation Brite KEGG Orthology (KO) [BR:vav00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     IG196_21335  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:vav03019]     IG196_21335 Enzymes [BR:vav01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      IG196_21335 Messenger RNA biogenesis [BR:vav03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Helicases      IG196_21335 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD Helicase_C ResIII P-loop_SecA CMS1 Motif Other DBs NCBI-ProteinID:  QOF76889 UniProt:  A0A7L8SAB6 LinkDB All DBs Position 4616412..4618235 Genome browser AA seq 607 aa AA seqDB search MNFDELKLAPAILKAVLEHGYDTPTPIQAQAIPVVLDGHDLLGGAQTGTGKTAAFTLPML HKLTMSRSATNKFGGIGIRALVLTPTRELAAQVEESVRTYGKYLQLDSTVIFGGVGMNPQ ISKLKKGVDILVATPGRLLDLQQQGMLDLSQVQMLILDEADRMLDMGFIHDVKKILALVP KEKQSLLFSATFSDEIRDLAGSLLKNPQSIQVTPRNTTVQRITQVIHPVGRGKKKALLAH IINEHKWSQVLVFTRTKFGANSVAEFLTKNGIEAMALHGNKSQSARTQALAGFKSGDIRA LVATDIAARGIDIDELPHVVNYEIPNVSEDYVHRIGRTGRAGSSGEAVSFVCLDEEGFMQ EIERFTKQTIPVQKVEGFGPEEGERAEPIAMGRQTIWGGAGRPPSREVMQAAAKAARTEM MSRIRENKAGQGGGNGGGGGGGNGGGQRRGGGQGGGGQGRNANGGGQGQGQGPRGPGAAR PAQGRGPQQGQPRAPQQPHHHTPHEERQPRHHGNSHSPTQANQVAHLRAEAVAGGGAAGQ PDPLRTSVDHMGGRGRGGRPGGGGGGGGYGGNRSGGGGRSGGGGGYGGGGGGGNRSGGGG GGRSFGR NT seq 1824 nt NT seq  +upstreamnt  +downstreamnt atgaattttgacgaactgaagctggccccggccatcttgaaggctgtgctcgaacacggc tacgacacccctacccccatccaggcacaagccattcccgtggtcctcgacggccacgac ctgctgggcggcgcccagaccggcaccggcaagaccgcggccttcaccctgccgatgctg cacaagctcaccatgagccgcagcgccaccaacaagttcggcggcatcggcatccgtgcc ctcgtgctgacccccacgcgtgaactcgcggcccaggtcgaagagtcggtgcgcacctac ggcaagtacctgcagctcgactccaccgtgatcttcggcggcgtgggcatgaacccgcag atcagcaagctcaagaagggtgtcgacatcctcgtggccacccccggccgcctgctcgac ctgcaacagcagggcatgctcgacctgagccaggtccagatgctgatcctggacgaagcc gaccgcatgctggacatgggcttcatccacgacgtgaagaagatcctggccctggtgccc aaggaaaagcagagcctgctgttctcggccaccttcagcgacgagatccgcgacctcgcc ggctcgctgctcaagaacccgcaaagcatccaggtcacgccgcgcaacaccacggtgcag cgcatcacgcaggtgatccaccccgtgggccgcggcaagaagaaggcgctgctcgcgcac atcatcaacgagcacaagtggagccaggtgctcgtgttcacgcgcaccaagttcggtgcc aacagcgtggccgagttcctcaccaagaacggcatcgaggcgatggcgctgcacggcaac aagagccagagcgcccgcacgcaggcgctggccggcttcaagagcggcgacatccgcgcg ctggtggccaccgacatcgcggcccgcggcatcgacatcgacgagctgccgcacgtcgtg aactacgaaatcccgaacgtcagcgaagactacgtgcaccgcatcggccgcaccggccgt gccggttcgagcggcgaggccgtgagcttcgtgtgcctggacgaagaaggcttcatgcag gaaatcgaacgcttcacgaagcagacgattccggtgcagaaggtcgagggcttcggtcct gaagaaggcgaacgcgccgagccgatcgccatgggtcgccagacgatctggggcggcgcc ggccgtccgccgagccgcgaagtcatgcaggcagccgccaaggccgcccgcaccgaaatg atgtcgcgcatccgcgagaacaaggctggccagggtggcggcaacggcggtggtggtggc ggcggcaatggcggcggtcaacgccgcggtggcggccagggcggcggcggtcaaggccgc aatgccaacggtggcggccaaggtcagggccaaggcccgcgcggcccgggcgcagcccgt cccgcacaaggtcgcggcccgcaacaaggccagccgcgcgcaccgcagcagccgcatcac cacacgccgcatgaagagcgccaaccgcgccatcacggcaacagccacagcccgacgcaa gccaaccaggtcgcacacctgcgcgctgaagccgtcgcaggcggcggtgcagccggccag ccggacccgttgcgcacgagcgtcgaccacatgggtggtcgcggtcgcggcggtcgcccg ggtggcggcggcggtggtggcggctacggcggcaaccgttcgggtggcggtggccgctcg ggtggtggcggtggctacggcggcggtggcggcggtggcaaccgctccggcggtggcggc ggcggtcgttcgttcggtcgctga

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