Variovorax sp. 38R: IG196_21700
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Entry
IG196_21700 CDS
T10235
Name
(GenBank) SDR family NAD(P)-dependent oxidoreductase
Organism
vav Variovorax sp. 38R
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Ortholog
Paralog
GFIT
Motif
Pfam:
Condensation
ketoacyl-synt
Acyl_transf_1
TauD
KR
Ketoacyl-synt_C
KAsynt_C_assoc
CurL-like_PKS_C
PP-binding
RhiE-like_linker
adh_short
Beta-ketacyl_N
adh_short_C2
Epimerase
Thiolase_N
Motif
Other DBs
NCBI-ProteinID:
QOF76961
LinkDB
All DBs
Position
complement(4707228..4714277)
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AA seq
2349 aa
AA seq
DB search
MHAQDDTPLSPETTGLTGLEIAIVGMAGRFPGAPDVDAFWRNIRDGVESVTAFSDDELRA
RGVPERALADPDYVKAGVLFDGFDRFDAGFFGYSPREAEHLDPQQRIFLECAWEAMDHAG
WPTGPEGGAPVGVYAGDGPNLYLMKHLLPAVGIDAGTGIADMLGLMSGNSAGSLCTRVAY
KLDLRGPAVSVQTECSTSLVAVHMACQGLLSHDCDMALAGGVWLNLLQEGGYRYQNGAIL
SPDGHCRAFDAKAAGTVIGSGAGIVVLRRLADALRDGDTIHAVIKGTAANNDGADKIGFT
APSVQGQAGAIRAAQLMADVPAHTVGYVEAHGTGTTLGDPIELAALTQAFRADGGDGGRC
GYCAIGSVKTNIGHLDAAAGVAGLIKATLALRHRTLPPSLHFEQPNPQIDFANSPFRVNT
EALPWPEGDTPRRAGVSSFGIGGTNVHVVLEEAPTVVASEPTTGWQVLPLSTRSASATRQ
AAQQLAEHLRAHPTLPLTDIAHTLQAGRRVFEHRSAVVADHAEGAVQMLSAGGGLAVRAA
PAQAPEVVFLFPGGGTQHAQMGRALYEDDATFRDDIDRCCALLEPELGFDLRTVLFPTPG
GEAEADARLFDISLAQPALFVIEYAMAQWWMRRGVRPAVMMGHSLGEYVAACLAGVFRLE
DALRVAALRGRLLQSMPPGAMTAVPLSQAALAPFLAPGCDLAAANAEQLCVISGPRDAVE
AAEARLRAAGHLPRRLHVSIASHSAMTEPLLAPLEALIASVPRRPPSIPFVSNVTGQLIT
AEEAMSPAYWARHLRGTVQFVDGVRTLLQVPGRVLLEVGPGETLAGLARQHPLADTAAGV
FASQAHPQQQARNAQQIAQTLAQLWVAGVDIDWAACRAGAARRRVPLPAYPFQRRRYWVE
APNGAKAPQRTNADAFYVPSWQRTEPLTLVPSTDVSGCLLVLGDSRSLTGHLVRQLRAQG
RTVVLAERGTAFACTGHGHWTLRPGARDDHARLQTEIAADFGAIAGIYHLWSLDETLPAQ
QLQAELLERSFFSLLALVQSLAAGDRTLPLVVVANQLEDVTGTELLCPEKATLRGIGKVI
GQEYPRVHCRVIDVVLPAPESDAEGRLVAQIVAEAAALQIEPGEPLVACRGAHRWIKTYE
PATLTVAAQPRLRREGVYLVTGGLGGVGLALAKHLAVQWQARLVLLGRTALPARAEWPAL
VTANGTPAALKTRLQQLLELEALGAQVLTVSADVSDADVMRAALAHANARFGPLHGVVHA
AGDAGGGMMAGRTRAQVDTVFATKVRGTRVLFDALRGQPLDFVLLCSSISSVAGGLGMSD
YAAANAYLDAVAVAHERLGAFPVFSVNWDAWRGLGMAAHMDVPDDIGMDGPEGARVFERI
VNGPVRAQTVISTADLATRLGPLDNGMLDLLGDEAPAAAAGSAHPRPALQTPFVAPQGEV
ETALAVLWTERLGIAPIGVDDNLFELGGDSLVAIQLLSRVRKLYATELHPSEFFKVPTIA
GLAARLGVASTATAPQRSAMEITPVARGGALPLSPMQRRLWLVDRLTDAANRSGRAAYNM
SAGLALHGELDIGALRAAIDAIVARHEVLRTVFTEDDDGEPMAVVRPGTPLDIPVIGLDD
SARYGQLFDELVRAPLALAEGPLIKATVVRMAAREHVLVLVVHHIVFDGWSIAVFARELA
AFYERARRGQPLQLAPLPVQYADYAAWYARALASDGFAPKVAFWRERLAGAPQTSGIKPD
HQRPAVPTHAGDSVRLTLSPALSQSLAALARASDTSLFTLLLSSFFLFFHQASGADDIVI
GTDVAGRGHTDLEGLLGFFVNVVPLRSRRAKGTIDFAHWLAATKADTLAAMDHQDVPFDR
IVELSGVPRARDRNPLVQVLFVLQNTPEIRFAIEGAEVEVLPQQMNESKFDLAVFASEHD
GALTAEWVFATDLYRRETVETFTASWHALLERIVATPSQPVDALAPMPMQEFIAMTNAPN
VRPASKLDKLGKLGKLDALGAGRAPVRAAARPAVQTSFLKPGAEFPIVLQATSPELDTVA
WAKGQADYIEMLVAKHGGILFRDFGLKTPQDFEAFAEAIEPELYGSYGDLPKKEGGKKTY
RSTPYPERQMILFHNESAHLDRWPRKQWFFCELPSPVGGATPIVDCREMLRRLPADVVAG
FERKGLQYVRTFTPGLDVSWQDFYKTERREDVEARLAAAGIEWRWFDGDTLQTRTRCPAV
IRHPLTGERVFFNQVQLHHVACLEAQVREDLLAMGGVERLPRHVTYGDGSPIADETMAIV
GEAYEACAVRFDWRQGDVVMLDNMLAAHARDPFEGPRKIVVAMGAMFDRAALDDGARGTE
SRLADEQGA
NT seq
7050 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcgcaagacgacaccccgctttcccccgagaccacgggcctcacgggcctcgag
atcgccatcgtcggcatggccggccgctttcccggcgcgcctgacgtggacgccttctgg
cgcaacatccgcgacggcgtcgagtcggtcacggccttcagcgacgacgaactgcgcgcg
cgcggcgtgcccgagcgcgcactggccgaccccgactacgtgaaggccggcgtgctgttc
gacggcttcgaccgcttcgacgccggcttcttcggctactcgccgcgcgaggccgagcac
ctcgatccgcagcagcgcatctttctcgaatgcgcctgggaagcgatggaccacgcgggc
tggcccaccggcccggagggtggggcgccggtcggcgtctacgcaggcgacggacccaac
ctctacctcatgaagcacctgctgcccgccgtcggcatcgacgcgggcacaggcatcgcc
gacatgctgggcctcatgagcggcaactccgccggctcgctgtgcacgcgcgtggcctac
aagctcgacctgcgcggcccggccgtgagcgtgcagaccgaatgctcgacctcgctggtg
gccgtgcacatggcctgccagggcctgctgagccacgactgcgacatggcgctggccggc
ggcgtgtggctcaacctgctgcaggagggcggctaccgctaccagaacggcgccatcctc
tcgcccgacggccactgccgcgccttcgacgcgaaggccgcgggcacggtcatcggcagc
ggcgcgggcatcgtcgtgctgcgccggctggctgatgcgctgcgcgacggcgacaccatc
catgccgtcatcaagggcaccgccgccaacaacgacggcgccgacaagatcggcttcacc
gcaccgagcgtgcagggccaggccggcgcgatccgcgcggcgcagctgatggccgacgtg
cccgcgcacacggtcggctacgtcgaggctcacggcaccggcaccacgctgggcgacccg
atcgagctggccgcgttgacgcaggccttccgtgccgatggcggcgacggcgggcgctgc
ggctactgcgccatcggctcggtcaagaccaacatcggccacctcgatgcggcggccggc
gtggccgggctcatcaaggcgacgctggcgctgcgccaccgcacgctgccgccgagcctg
catttcgagcaaccgaacccgcagatcgatttcgcgaacagtccgttccgcgtgaacacc
gaagcactgccgtggcccgagggcgatacgccgcgtcgtgcgggcgtcagctccttcggc
attgggggtaccaacgtgcatgtcgtgctcgaagaggcgccgaccgttgttgcgtccgaa
ccaacaacaggctggcaggtgctgccgttgtcgacccgcagcgcatctgcgacgcgacag
gccgcacagcaactggccgagcatctgcgcgcgcaccccacgctgccgctcaccgacatc
gcccacaccttgcaagcaggccgccgcgtcttcgagcaccgcagcgcggtcgtggccgac
cacgccgaaggcgccgtgcagatgctctcggcgggtggcggcctggccgtgcgcgccgca
cccgcgcaggcgcccgaggtggtcttcctcttccccggtggcggcacgcagcacgcgcag
atgggccgcgcgctctacgaggacgacgcgactttccgcgacgacatcgaccgctgctgc
gcactgctggaacccgagctgggcttcgacctgcgcaccgtgttgttccccacgcccggt
ggcgaagccgaggccgacgcgcggctgttcgatatctcgctcgcgcaacccgcgctgttc
gtcatcgaatacgcgatggctcagtggtggatgcgccgcggcgtgcggcccgcggtgatg
atgggtcacagcctcggcgagtacgtcgccgcctgcctcgcgggcgtgttccgcctcgaa
gacgcgctgcgcgtcgcggccctgcgcgggcgcctgttgcagtcgatgccgcccggcgcg
atgacggccgtgccgctgtcgcaggccgcgctcgcgcccttcctggcgccgggctgcgac
ctggccgctgccaatgccgagcagctgtgcgtgatctccggcccgcgcgacgcggtcgag
gccgccgaggcgcggctgcgcgcggcgggccacctgccgcgccggctgcatgtgtcgatc
gcctcgcactcggcgatgaccgagccgctgctcgcgccgctcgaagcgctcatcgcttcg
gtgccgcgccggccgccgagcattcccttcgtctcgaacgtcacgggccaactcatcact
gccgaggaggccatgagccccgcctactgggcgcggcacctgcgtggcaccgtccagttc
gtcgacggcgtgcgcaccttgctgcaggtgccgggccgcgtgctgctcgaagtcggtccc
ggcgaaacgctggcgggcctggcgcgccagcatccgctggccgacaccgccgccggcgtg
ttcgccagccaggcgcacccgcagcagcaggcgcgcaacgcgcagcagatcgcgcagacg
ctggcccagctgtgggtcgcgggcgtggacatcgactgggccgcctgccgtgcgggcgcc
gcgcgtcggcgcgtgccgttgccggcgtatccgttccagcgccgccgctactgggtggaa
gcgcccaatggtgcgaaggccccgcaacgcaccaacgccgacgcgttttatgtgccgtca
tggcaacgcacggagccgctcacgctcgtgccttcgaccgatgtcagcggttgcctgctc
gtgctcggcgacagccgcagcctcacgggccacctcgtgcgccagctgcgcgcgcagggc
cgcacggtcgtgctcgccgagcggggcactgccttcgcatgcacgggccacggccactgg
acgctgcgccccggcgcacgcgacgaccacgctcgtctgcagaccgagatcgcggccgac
ttcggcgccatcgccggcatctaccacctctggagcctcgacgagacgctgcccgcgcag
cagctgcaagccgagctgctcgaacgcagcttcttcagcctgctcgcgctcgtgcaatcg
ctagcagccggcgaccgcacgctgccgctcgtcgttgtcgccaaccagctcgaagacgtc
accggcaccgaactgctgtgccccgagaaggccacgctgcgcggcatcggcaaggtgatc
ggccaggaatacccgcgcgtgcattgccgcgtgatcgacgtcgtgctgcccgcgcccgaa
agcgatgccgaaggccggctggtcgcccagatcgtggccgaggccgcggcgttgcagatc
gagcccggcgagccgctcgtggcttgccgcggtgcgcaccgctggatcaagacctacgaa
cccgcgacgttgaccgtcgccgcgcagccgcgcctgcgccgcgagggcgtctacctcgtc
accggcggcctcggcggtgtcggccttgcgctggcgaagcacctggccgtgcagtggcag
gcgcggctggtgctgctcggacgcacggcgttgccggcgcgcgcggaatggcccgcgctg
gtgacggccaacggcacgcccgccgctctgaagacgcggctgcagcagctgctcgaactc
gaagcgctcggcgcgcaggtgctcaccgtgtcggcggatgtgtccgacgccgacgtgatg
cgcgccgccctcgcacacgccaatgcccgcttcggcccgctgcacggcgtggtgcacgcg
gccggcgatgcgggcggcggcatgatggccgggcgcacgcgggcgcaggtcgacaccgtg
ttcgcgaccaaggtgcgcggcacccgcgtgctgttcgacgcgctgcgcggccagccgctg
gacttcgtgctgctgtgctcgtccatctccagcgtggccggcggcctgggcatgagcgac
tacgccgccgccaacgcctacctcgacgccgtggccgtcgcgcacgagcggctcggcgcg
ttcccggtgttctcggtcaactgggacgcctggcgcggcctgggcatggctgcgcacatg
gacgtgcccgacgacatcggcatggacggtcccgagggcgcgcgcgtcttcgagcgcatc
gtcaacggcccggtgcgcgcgcagaccgtcatctcgaccgctgacctggccacgcgcctg
ggcccgctcgacaacggcatgctcgacctgctcggcgacgaggcaccggccgctgccgca
ggctcggcgcatccccggcccgcgctgcagaccccgttcgtcgcgccgcagggcgaggtc
gagaccgcgctcgccgtgctgtggaccgagcgcctgggcatcgcacccatcggcgtggac
gacaacctgttcgaacttggcggcgattcgctcgtcgccatccagctgctgtcgcgcgtg
cgcaagctctacgcgaccgagctgcaccccagcgaattcttcaaggtaccgaccatcgcc
ggcctggccgcgcggctcggcgtcgcctcgaccgccaccgcaccgcagcgcagcgcgatg
gagatcacgcccgtcgcgcggggcggcgcgctgccgctgtcgccgatgcagcgccgcctc
tggctggtcgatcgcctcaccgacgctgccaaccgcagcggccgcgcggcctacaacatg
tcggccggcctcgcgctgcacggcgagctcgacatcggcgcgctgcgcgccgccatcgac
gccatcgtggcgcgccacgaggtgctgcgcaccgtgttcaccgaagacgacgacggcgag
cccatggccgtcgtgcgccccggcacaccgctcgacattcccgtgatcgggctcgacgac
agcgcgcgctacggccagctgttcgacgaactggtgcgcgcaccgctcgcactggccgag
ggcccgctcatcaaggccaccgtcgtgcgcatggctgcgcgcgagcatgtgctggtgctc
gtggtgcaccacatcgtgttcgacggctggtcgatcgccgtgttcgcacgcgaactggct
gcgttctacgagcgcgcgcggcgcggccagccactccagctggcaccgctgcccgtgcag
tacgccgactacgccgcctggtatgcgcgtgcgctggcctccgacggctttgcgccgaag
gtcgcgttctggcgcgaacggctggcgggcgcgccgcagacctcgggcatcaaacctgac
caccagcgcccggcagtgcccacgcacgccggcgactcggtgcggctcacgctgtcgccc
gcgctgtcgcagtcgctggccgcgctcgcgcgggcgtcggacacctcgctgttcacgctg
ctgctgtcgtcgttcttcctgttcttccaccaggcctcgggcgccgacgacatcgtcatc
ggcaccgacgtcgcgggccgcggccatacggacctcgaagggctgctcggcttcttcgtc
aacgtggtgccgctgcgctcgcgccgcgcgaagggaacgatcgacttcgcgcactggctg
gccgccaccaaggccgacaccctggccgcgatggaccaccaggacgtgcccttcgaccgc
atcgtcgagctgtcgggcgtgccgcgtgcacgcgaccgcaacccgctggtgcaggtgctc
ttcgtgctccagaacacacccgagatccggttcgccatcgaaggcgccgaggtcgaggtg
ctgccccagcagatgaacgaatccaagttcgacctcgcggtgttcgccagcgaacacgac
ggcgcgctcaccgccgagtgggtgttcgccaccgacctctaccggcgggagaccgtcgaa
accttcaccgcttcgtggcatgcgctgctggagcggatcgtcgccacacccagccagccc
gtcgacgcgctggcccccatgcccatgcaggaattcatcgccatgaccaatgctcccaac
gtccgcccggcctcgaaactggacaagctcggcaaacttggaaagctcgatgccctgggc
gccggccgcgcgcccgtgcgcgccgccgcgcggcccgccgtgcagacctcgttcctgaag
cccggggccgagttccccatcgtgctgcaggccaccagccccgagctcgacaccgtggcc
tgggccaagggccaggccgactacatcgagatgctggtggccaagcacggcggcatcctg
ttccgcgatttcggcctgaagacgccgcaggacttcgaggccttcgccgaggccatcgag
cccgagctgtacggcagctacggcgacctgccgaagaaggagggcggcaagaagacctac
cgctccacgccgtaccccgagcgtcagatgatcctgttccacaacgagagcgcgcacctg
gaccgctggccgcgcaagcagtggttcttctgcgagctgccgtcgcccgtgggcggcgcc
acgcccatcgtcgactgccgcgagatgctgcgccgcctgccggccgacgtggtggccggc
ttcgagcgcaaggggctgcaatacgtgcgcaccttcacgcccggcctggacgtgagctgg
caggacttctacaagaccgagcgccgcgaagacgtcgaggcgcgcctggccgccgccggc
atcgaatggcgctggttcgacggcgacacgctgcagacgcgcacccgctgccccgccgtg
atccgccatccgctgaccggcgagcgcgtgttcttcaaccaggtgcagctgcaccacgtt
gcctgcctcgaagcgcaggtgcgcgaagacctgctggccatgggcggcgtcgagcgcctg
ccgcgccacgtgacctacggcgacggctcgcccatcgcggacgaaaccatggccatcgtc
ggcgaggcctacgaggcctgcgccgtgcgcttcgactggcgccagggcgacgtcgtgatg
ctcgacaacatgctcgccgcccatgcgcgcgaccccttcgagggcccgcgaaaaatcgtg
gtggcgatgggcgcgatgttcgaccgcgccgcgctcgacgacggcgcgcgcggcaccgag
tcccgcctggccgacgaacaaggcgcctga
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