Variovorax sp. 38R: IG196_22110
Help
Entry
IG196_22110 CDS
T10235
Name
(GenBank) branched-chain amino acid ABC transporter permease
KO
K01997
branched-chain amino acid transport system permease protein
Organism
vav Variovorax sp. 38R
Pathway
vav02010
ABC transporters
vav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IG196_22110
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IG196_22110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_22110
Transporters [BR:
vav02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
IG196_22110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
QOF77033
LinkDB
All DBs
Position
complement(4786771..4787826)
Genome browser
AA seq
351 aa
AA seq
DB search
MNWDVALILVTDGLANGAVYLLAGLGLVLIFSVTRVVFVPFGDIAAFAALSLAAFETGRV
PPTIGMVAVLAALALATEVGSLLRRGETARIPKAVLMWGVLPAIPCVLAWLAARPGVPVA
VHIAVAVLLVVPIAPLLARVVFQPIADASVLVLLIVSLALHFLLSGLGLLFFGPEGSRTT
PLTSAVFTLGDGFTVSGQVVLMVGAAIVLSGLFFLVFERTVAGKALRATAVNRVGARLVG
IRPVRTALLAYGCASLLAGLIGVLIAPVTTMYYDSGFIIGLKAFVAAIIGGLVSYPMTAI
GALAVGVVESFASFWSGALKDVIVFSLLIPVLMLRSFMAAHSEEEEDEVDQ
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaactgggacgtggcgctgatcctcgtcaccgacggcctggccaacggtgccgtctat
ctgctcgccggcctcgggctggtgctgatcttctcggtcacgcgggtggtgttcgtgccg
ttcggcgacatcgcggcctttgccgccctgtcgctggcggccttcgaaaccggccgcgtg
ccgccgaccatcggcatggtcgcggtgctggccgcgctggcgctggccaccgaagtcggc
agcctgctgcggcgcggcgagaccgcacgcataccgaaggcggtgctgatgtggggcgtg
ctgcccgccattccgtgcgtgctcgcctggctggcggcgcggcccggcgtgccggtggcc
gtgcacatcgcggtggcggtgctgctggtggtgcccatcgcgccgctgctggcgcgcgtg
gtgttccagccgatcgccgatgcctcggtgctggtgctgctgatcgtgtcgctcgcgttg
cactttctgctgtcgggcctgggcctgctgttcttcgggcctgaaggctcgcgcaccacg
ccgctcacgagcgcggtgttcacgctgggcgacggcttcacggtcagcggccaggtggtg
ctgatggtgggcgcggccattgtgctgagcgggctgttcttcctggtgttcgagcgcacg
gtggccggcaaggcgctgcgcgccacggccgtgaaccgcgtgggcgcgcggctggtcggc
atccggccggtgcgcacggcgctgctggcctacggctgcgcctcgctgctggcggggctc
atcggcgtgctgattgcgccggtgaccaccatgtactacgactcgggtttcatcatcggc
ctgaaggccttcgtggccgcgatcatcggcgggctcgtgagctacccgatgacggccatc
ggcgcgctggcggtcggcgtggtcgagagcttcgcgtcgttctggagcggcgcgctgaaa
gacgtgatcgttttcagcctgctgatcccggtgctcatgctgcgctccttcatggcggcc
cattcggaagaggaagaagacgaggtggaccaatga
DBGET
integrated database retrieval system
