Variovorax sp. 38R: IG196_22885
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Entry
IG196_22885 CDS
T10235
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
vav Variovorax sp. 38R
Pathway
vav00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IG196_22885
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vav01007
]
IG196_22885
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vav03016
]
IG196_22885
Enzymes [BR:
vav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
IG196_22885
Amino acid related enzymes [BR:
vav01007
]
Aminoacyl-tRNA synthetase
Class I (G)
IG196_22885
Transfer RNA biogenesis [BR:
vav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
IG196_22885
Prokaryotic type
IG196_22885
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
tRNA-synt_1f
DUF1508
Motif
Other DBs
NCBI-ProteinID:
QOF77179
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Position
4943020..4944351
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AA seq
443 aa
AA seq
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MASSSPAPLRVLTGITPSGTPHLGNYVGSIRHSVRQSVAAGVESYFFLADYHALIKVQEP
ALIQRSTLEIAASWLACGLDPERVTFYRQSDIAEITELTWFLTCVTGKGVLNRAHAYKAQ
LDKNIAKGEEPDADVTAGLFMYPVLMGADILMFNAHKVPVGRDQVQHIEMARDMAQRFNH
QYGEHFTLPDAEIDDAVATLPGLDGRKMSKSYNNTIPLFAPRAQLQKQIASIVTDSRAPG
EPKDTEGSALFQIYQAFASAEETEALRKAYADGIAWGDAKQVLFERIDREVAPLRARYEA
LMNDPAEIERILLLGAEKARKLSRPFMTSLRHAVGLRNLAAGRDGGGTKAAKVAKPSFKQ
YREKADGLFYFKLLDARGETLLQSRGFASPQEAGRTIADLQAQRGAALTVLAAQLEPVDA
QQARAATEALEALAEATSTTQGH
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtcttctcccgctcccctgcgcgtcctgaccggcatcacgccgtcgggcacg
ccgcacctcggcaactacgtcggctcgatccgccactcggtgcgccagagcgtcgcggcc
ggcgtcgagagctacttcttcctggccgactaccacgcactcatcaaggtgcaggagccc
gcgctcatccagcgctccacgctcgaaattgcggccagctggctggcctgcgggctcgac
cccgaacgcgtcacgttctatcgccaatcggacatcgccgagatcaccgagctcacctgg
ttcctgacctgcgtcaccggcaagggcgtgctcaaccgcgcccatgcctacaaggcccag
ctcgacaagaacatcgccaagggcgaagagcccgacgccgacgtcacggcgggcctgttc
atgtaccccgtgctgatgggcgccgacatcctgatgttcaacgcccacaaggtgcccgtg
ggccgcgaccaggtgcagcacatcgagatggcgcgcgacatggcgcagcgcttcaatcac
cagtacggcgagcacttcacgctgcccgacgccgagatcgacgatgcggtcgccaccttg
cccggcctcgacggccgcaagatgagcaagagctacaacaacacgatcccgctgttcgcg
ccgcgcgcgcagctgcaaaagcagatcgccagcatcgtcaccgactcgcgcgcgcccggc
gagcccaaggacaccgagggctcggccctgttccagatctaccaggccttcgccagcgcc
gaagaaaccgaagccctgcgcaaggcgtacgccgacggcatcgcctggggcgacgccaag
caggtgctgttcgagcgcatcgaccgcgaagtggcgccgctgcgtgcgcgctacgaggcg
ctcatgaacgacccggccgagatcgagcgcatcctgctgctgggcgccgagaaggcgcgc
aagctgtcgcgccccttcatgacctcgctgcgccacgcggtcggcctgcgcaacctcgcg
gcaggccgcgacggcggcggcaccaaggctgccaaggtggcaaagcccagcttcaagcaa
taccgcgagaaggccgacggccttttctatttcaagctgctcgatgcgcgcggcgaaacc
cttttgcaaagccgtggattcgcgtcaccgcaggaagcgggccgtaccatcgccgacttg
caggcgcaacgcggcgcggcgctcacagtactggccgcgcagctcgaaccggtcgacgcg
caacaggctcgcgccgccaccgaggcgctggaggcactggcggaggcaacgtccaccact
cagggacattga
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