KEGG   Variovorax sp. 38R: IG196_23250
Entry
IG196_23250       CDS       T10235                                 
Name
(GenBank) PAS domain S-box protein
  KO
K03776  aerotaxis receptor
Organism
vav  Variovorax sp. 38R
Pathway
vav02020  Two-component system
vav02030  Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:vav00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    IG196_23250
 09140 Cellular Processes
  09142 Cell motility
   02030 Bacterial chemotaxis
    IG196_23250
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:vav02035]
    IG196_23250
Bacterial motility proteins [BR:vav02035]
 Flagellar system
  Chemotaxis proteins
   MCPs
    IG196_23250
SSDB
Motif
Pfam: MCPsignal PAS_3 PAS_9 PAS PAS_4 HAMP PAS_8 ApoLp-III Synaptobrevin DUF6171 ATG16 COG6_N zf-C4H2 Spectrin_SYNE1 CENP-H
Other DBs
NCBI-ProteinID: QOF77244
UniProt: A0A7L8SBL4
LinkDB
Position
complement(5021187..5022809)
AA seq 540 aa
MRVNLPVTDIEYELSKEEALVSRTDLKGRITYVNPAFVAASGFAAAELLGKAHNIVRHPD
VPPEAFADLWRTLDQGLPWTGLIKNRRKNGDFYWVLANVTPIRHQGRVEGYMSVRSRPAR
EDVLAADALYRRMREGEAKGLELLQGEVVRSGWVRPLARLRRIPVRRRVFGVTVAAAALS
AGLGAMGWMEASRLVAASGAHSWLPNAVAAGSLGAALAWLSLGAFLGRTVFRPLDDAIEV
ARTIAGGDLVRFTVRPGDEIAGLLRALNQMSANLFAIVADVGANVAGVMSASSQIASGNQ
DLSSRTEQQASSLEQTAASMEELTSTVKQNADNALQANQLAVSASEVAVKGGAVVSQVVD
TMGSINASSKKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGKGFAVVASEVRSLAQR
SAAAAKEIKTLIGDSVEKVEAGSKQVAEAGRTMQEIVGSVKRVTDIMGEITTASQEQTSG
IEQINQAIAQMDQVTQQNAALVEEATATAQSLQEQAEGLVRAAGVFRTGAGEGAGVRDAY
NT seq 1623 nt   +upstreamnt  +downstreamnt
atgcgtgtcaatctgcccgtcaccgacatcgaatacgaactgtcgaaggaagaggccctg
gtgtcccgcaccgacctcaagggccgcatcacctacgtcaacccggccttcgtcgcggcc
agcggcttcgcggccgccgaactgctgggcaaggcgcacaacatcgtgcgccaccccgac
gtgccgcccgaggccttcgccgacctgtggcgcaccttggaccagggcctgccctggacc
ggcctcatcaagaaccggcgcaagaacggcgacttctactgggtgctcgccaacgtcacg
ccgattcgccaccagggccgcgtggagggctacatgtccgtgcgcagccgtcccgcgcgc
gaggacgttttggccgccgatgcgctctaccgccgcatgcgcgagggcgaggccaagggt
ctcgaactgttgcagggcgaggtggtgcgcagcggctgggtgcgtccgctggcgcggctg
cggcgcatccccgtgcggcggcgtgtgttcggcgtgacggtcgcggcggctgcgctgtca
gcgggcctgggcgcgatgggctggatggaagcgtcccgcctggtggccgcgtccggcgcg
cacagctggctgcccaacgccgtggcagcgggcagccttggtgccgcactggcgtggctg
agcctcggtgcgttcctcgggcgcacggtcttccgtccgctcgatgacgccatcgaggtc
gcgcggaccatcgcgggtggtgacctcgtgcgtttcacggtgcgacccggcgacgagatc
gcggggctgctgcgcgcgctgaaccagatgagcgccaacctcttcgcgatcgtcgcggac
gtcggcgcgaacgtggcgggcgtgatgtcggcgtcgagccagatcgcctcgggcaaccag
gacctgtcgtcgcgcaccgagcagcaggccagctcgctcgaacagacggccgcatcgatg
gaagagctgacctcgaccgtgaagcagaacgcggacaacgcactgcaggcgaaccagctg
gctgtctccgcctccgaagtggcggtgaagggcggcgccgtggtgtcgcaggtcgtggac
acgatgggctcgatcaacgcctcgtcgaaaaagatcgtcgacatcatcggcgtgatcgac
ggcatcgcgttccagaccaacatcctcgcgctgaacgcggccgtggaagccgcgcgcgcg
ggcgagcagggcaagggctttgcggtggtcgcgtcggaggtgcgcagcctcgcgcagcgc
tcggcggctgccgcgaaagaaatcaagaccctcatcggcgactcggtggagaaggtcgag
gcgggcagcaagcaggtggccgaggccggccggaccatgcaggagatcgtcggcagcgtg
aagcgcgtgaccgacatcatgggcgagatcaccacggcgagccaggagcagacctcgggc
atcgagcagatcaaccaggccatcgcgcagatggaccaggtgacacagcagaacgccgcg
ctggtcgaagaggccacggccacggcgcagtcgctgcaggaacaggccgagggcctggtc
cgggccgcaggggtattcaggaccggggcgggcgagggtgccggcgtccgggatgcgtat
tga

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