Variovorax sp. 38R: IG196_23250
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Entry
IG196_23250 CDS
T10235
Name
(GenBank) PAS domain S-box protein
KO
K03776
aerotaxis receptor
Organism
vav Variovorax sp. 38R
Pathway
vav02020
Two-component system
vav02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IG196_23250
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
IG196_23250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vav02035
]
IG196_23250
Bacterial motility proteins [BR:
vav02035
]
Flagellar system
Chemotaxis proteins
MCPs
IG196_23250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
PAS_3
PAS_9
PAS
PAS_4
HAMP
PAS_8
ApoLp-III
Synaptobrevin
DUF6171
ATG16
COG6_N
zf-C4H2
Spectrin_SYNE1
CENP-H
Motif
Other DBs
NCBI-ProteinID:
QOF77244
UniProt:
A0A7L8SBL4
LinkDB
All DBs
Position
complement(5021187..5022809)
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AA seq
540 aa
AA seq
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MRVNLPVTDIEYELSKEEALVSRTDLKGRITYVNPAFVAASGFAAAELLGKAHNIVRHPD
VPPEAFADLWRTLDQGLPWTGLIKNRRKNGDFYWVLANVTPIRHQGRVEGYMSVRSRPAR
EDVLAADALYRRMREGEAKGLELLQGEVVRSGWVRPLARLRRIPVRRRVFGVTVAAAALS
AGLGAMGWMEASRLVAASGAHSWLPNAVAAGSLGAALAWLSLGAFLGRTVFRPLDDAIEV
ARTIAGGDLVRFTVRPGDEIAGLLRALNQMSANLFAIVADVGANVAGVMSASSQIASGNQ
DLSSRTEQQASSLEQTAASMEELTSTVKQNADNALQANQLAVSASEVAVKGGAVVSQVVD
TMGSINASSKKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGKGFAVVASEVRSLAQR
SAAAAKEIKTLIGDSVEKVEAGSKQVAEAGRTMQEIVGSVKRVTDIMGEITTASQEQTSG
IEQINQAIAQMDQVTQQNAALVEEATATAQSLQEQAEGLVRAAGVFRTGAGEGAGVRDAY
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtcaatctgcccgtcaccgacatcgaatacgaactgtcgaaggaagaggccctg
gtgtcccgcaccgacctcaagggccgcatcacctacgtcaacccggccttcgtcgcggcc
agcggcttcgcggccgccgaactgctgggcaaggcgcacaacatcgtgcgccaccccgac
gtgccgcccgaggccttcgccgacctgtggcgcaccttggaccagggcctgccctggacc
ggcctcatcaagaaccggcgcaagaacggcgacttctactgggtgctcgccaacgtcacg
ccgattcgccaccagggccgcgtggagggctacatgtccgtgcgcagccgtcccgcgcgc
gaggacgttttggccgccgatgcgctctaccgccgcatgcgcgagggcgaggccaagggt
ctcgaactgttgcagggcgaggtggtgcgcagcggctgggtgcgtccgctggcgcggctg
cggcgcatccccgtgcggcggcgtgtgttcggcgtgacggtcgcggcggctgcgctgtca
gcgggcctgggcgcgatgggctggatggaagcgtcccgcctggtggccgcgtccggcgcg
cacagctggctgcccaacgccgtggcagcgggcagccttggtgccgcactggcgtggctg
agcctcggtgcgttcctcgggcgcacggtcttccgtccgctcgatgacgccatcgaggtc
gcgcggaccatcgcgggtggtgacctcgtgcgtttcacggtgcgacccggcgacgagatc
gcggggctgctgcgcgcgctgaaccagatgagcgccaacctcttcgcgatcgtcgcggac
gtcggcgcgaacgtggcgggcgtgatgtcggcgtcgagccagatcgcctcgggcaaccag
gacctgtcgtcgcgcaccgagcagcaggccagctcgctcgaacagacggccgcatcgatg
gaagagctgacctcgaccgtgaagcagaacgcggacaacgcactgcaggcgaaccagctg
gctgtctccgcctccgaagtggcggtgaagggcggcgccgtggtgtcgcaggtcgtggac
acgatgggctcgatcaacgcctcgtcgaaaaagatcgtcgacatcatcggcgtgatcgac
ggcatcgcgttccagaccaacatcctcgcgctgaacgcggccgtggaagccgcgcgcgcg
ggcgagcagggcaagggctttgcggtggtcgcgtcggaggtgcgcagcctcgcgcagcgc
tcggcggctgccgcgaaagaaatcaagaccctcatcggcgactcggtggagaaggtcgag
gcgggcagcaagcaggtggccgaggccggccggaccatgcaggagatcgtcggcagcgtg
aagcgcgtgaccgacatcatgggcgagatcaccacggcgagccaggagcagacctcgggc
atcgagcagatcaaccaggccatcgcgcagatggaccaggtgacacagcagaacgccgcg
ctggtcgaagaggccacggccacggcgcagtcgctgcaggaacaggccgagggcctggtc
cgggccgcaggggtattcaggaccggggcgggcgagggtgccggcgtccgggatgcgtat
tga
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