Variovorax sp. 38R: IG196_24340
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Entry
IG196_24340 CDS
T10235
Name
(GenBank) TetR family transcriptional regulator C-terminal domain-containing protein
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
vav Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vav03000
]
IG196_24340
Transcription factors [BR:
vav03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
IG196_24340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
TetR_C_9
DUF8494
Motif
Other DBs
NCBI-ProteinID:
QOF77451
LinkDB
All DBs
Position
complement(5231445..5232131)
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AA seq
228 aa
AA seq
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MSIAPRPPAVKRQARRQNLESAILAVAQECFALHGYGGVSVDDIAADAGVSKQSLLYYFP
SKKALYRRVFNDVLDSWLSNLNSLADADLDPHAALERYVTQKLKFSYDHPSGSRLFAQEI
ISQAPQCADDIQAKLVPAFRAEAAVLQRWMAGGDIDPLPVPHLLFTLWAMTQTYADFAWQ
MRMLLGKQALEPEDFDQARETIMRMLEGALSLSRPATSAVVASPPWNG
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgagcattgcgccacgtccccccgcggtgaagcgccaggcgcgccgccagaacctggag
agcgcgatcctcgccgtcgcgcaggagtgctttgcgctgcacggctatggcggcgtgtcg
gtcgacgacatcgcagccgatgcgggcgtttccaagcagagcctgctgtattactttccc
tcgaagaaggcgctgtaccggcgtgttttcaacgacgtgctggattcgtggctgtcgaac
ctgaacagcctcgccgatgcagacctcgatccgcacgcggcgctggagcgctacgtcacg
cagaagctcaagttctcctacgaccacccttcgggttcgcggctgttcgcgcaggaaatc
atctcgcaggcaccgcagtgcgctgacgatatccaggccaagctggtgcccgcctttcgg
gccgaggcggccgtgctgcaacgctggatggcgggcggcgacatcgatccgctgccggtg
ccgcacctgctcttcacgctgtgggccatgacccagacttatgccgacttcgcctggcag
atgcggatgctgctcggcaagcaggcgctggagccggaagatttcgaccaggcgcgcgag
acgatcatgcggatgctggaaggggcgctgagcttgtcgcggcccgcgacatcggcggtg
gtggcgagcccgccgtggaacggctga
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