KEGG   Variovorax sp. 38R: IG196_24350
Entry
IG196_24350       CDS       T10235                                 
Name
(GenBank) NAD(P)-dependent oxidoreductase
  KO
K17722  dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
Organism
vav  Variovorax sp. 38R
Pathway
vav00240  Pyrimidine metabolism
vav00410  beta-Alanine metabolism
vav00770  Pantothenate and CoA biosynthesis
vav01100  Metabolic pathways
Module
vav_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate
Brite
KEGG Orthology (KO) [BR:vav00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00240 Pyrimidine metabolism
    IG196_24350
  09106 Metabolism of other amino acids
   00410 beta-Alanine metabolism
    IG196_24350
  09108 Metabolism of cofactors and vitamins
   00770 Pantothenate and CoA biosynthesis
    IG196_24350
Enzymes [BR:vav01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.1  dihydropyrimidine dehydrogenase (NAD+)
     IG196_24350
SSDB
Motif
Pfam: Fer4_20 Pyr_redox_2 Pyr_redox NAD_binding_8 FAD_oxidored Pyr_redox_3 DAO HI0933_like GIDA FAD_binding_2 Amino_oxidase Lycopene_cycl ApbA AlaDh_PNT_C Thi4 FAD_binding_3 UDPG_MGDP_dh_N 2-Hacid_dh_C MurD-like_N Fer4_7 NAD_Gly3P_dh_N NAD_binding_9 3HCDH_N XdhC_C
Other DBs
NCBI-ProteinID: QOF82047
UniProt: A0A7L8SQ76
LinkDB
Position
5233889..5235247
AA seq 452 aa
MNPVAPSAHIASDVRAGRLDPAQYAKNFCDAHPPLNVVQANIEAERCYYCFDAPCQTACP
TGIDIPTFIRRIADGNLRGAARTILEENPLGGMCARVCPTEVLCEQACVRNSNESKPVEI
GLLQRHATDAFFDAPGAPLFVRAADTGKRIAVVGAGPAGLACAHRLAVLGHQVTLFDARP
KLGGLNEYGLASYKTVDGFAQREIEWLLSVGGIEVRNNQALGRELHLDALATDYDAVFLG
LGLAGVNALGLGEQTGVRDAVDFIAELRQAASPADVAIGRHVVVIGGGMTAVDAAVQSRK
LGAEDVSIVYRRGAEAMGASIDEQSWAKENGVRIIHWAAPKALRAKGGVLRGIDFARTAL
VDGKLVETGEALALQADMVLCAIGQSFVATVLEDSGVRLQGGRIDTDAECRSSRPKVWAG
GDARFGGRDLTVEAVEDGKQAALSIDRHLRAA
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgaatcccgtcgcgcccagcgcgcacattgcctccgatgtgcgcgccggccgtctcgac
cccgcgcagtacgccaagaacttctgcgacgcccacccgccgctgaacgtggtgcaagcc
aacatcgaggccgagcgctgctactactgcttcgacgcgccctgccagacggcctgcccc
acgggcatcgacatcccgaccttcatccgccgcattgccgacggcaacctgcgcggcgcg
gcgcgcaccatcctcgaagagaacccgctgggcggcatgtgcgcccgcgtctgccccacc
gaagtgctgtgcgagcaggcctgcgtgcgcaacagcaacgagagcaagccggtcgagatc
ggcctgctgcagcgccacgcgaccgatgccttcttcgacgcgcccggcgcaccgctgttc
gtgcgcgcggccgataccggcaagcgcattgccgtcgtcggtgcgggcccggccggcctg
gcctgcgcgcaccgcctcgcggtgctgggccaccaggtgacgctgttcgacgcgcgcccc
aagctcggcggcctgaacgagtacggcctggccagctacaagacagtggacggcttcgcg
cagcgcgagatcgaatggctgctgtcggtcggcggcatcgaggtgcgcaacaaccaggcg
ctgggccgcgagctgcacctggacgcgctcgccaccgactacgacgcagtgttcctgggc
ctcggcctggccggcgtgaacgcgctgggcctgggcgagcagaccggcgtgcgcgacgcg
gtggacttcatcgccgagctgcgccaggccgcctcgccggccgacgtggcgatcggccgc
cacgtggtggtgatcggcggcggcatgaccgcggtggatgcggccgtgcagtcgcgcaag
ctcggcgcggaagacgtgagcatcgtctaccggcgcggcgccgaggccatgggcgcctcg
atcgacgagcagagctgggccaaggagaacggcgtgcgcatcatccactgggccgcaccc
aaggccctgcgcgccaagggcggcgtgctgcgcggcatcgacttcgcgcgtaccgcgctg
gtcgacggcaagctggtcgagaccggcgaggccctcgcgctgcaggccgacatggtgctg
tgcgccatcggccagagctttgtcgcgaccgtgctggaagacagcggtgtgcggctgcaa
ggcgggcgcatcgacaccgatgccgaatgccgcagctcgcgccccaaggtctgggccggc
ggcgacgcgcgcttcggcgggcgcgacctcacggtcgaggcggtggaagacggcaagcag
gccgcgctgtccatcgaccgccacctgcgcgccgcctga

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