Variovorax sp. 38R: IG196_25335
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Entry
IG196_25335 CDS
T10235
Name
(GenBank) bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
KO
K01139
GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:
2.7.6.5
3.1.7.2
]
Organism
vav Variovorax sp. 38R
Pathway
vav00230
Purine metabolism
vav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
IG196_25335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vav03009
]
IG196_25335
Enzymes [BR:
vav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.6 Diphosphotransferases
2.7.6.5 GTP diphosphokinase
IG196_25335
3. Hydrolases
3.1 Acting on ester bonds
3.1.7 Diphosphoric-monoester hydrolases
3.1.7.2 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
IG196_25335
Ribosome biogenesis [BR:
vav03009
]
Prokaryotic type
Other maturation factors
IG196_25335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD_4
RelA_SpoT
TGS
ACT_4
RelA_AH_RIS
HD
ACT
ThiS
ACT_AHAS_ss
DUF1087
UreF
Motif
Other DBs
NCBI-ProteinID:
QOF77636
LinkDB
All DBs
Position
5467230..5469473
Genome browser
AA seq
747 aa
AA seq
DB search
MSAVAKPTSPTPKPSPAALNAAAASFAALTARLDYLSPEDTELVRRAYRFADEAHLGQLR
NSGEPYITHPIAVAAQCAEWKLDAQALMAALLHDAIEDCGVTKPELIERFGAPVAELVDG
LTKLDKLQFNTREENQAESFRKMLLAMARDVRVILVKLADRTHNMRTLADAPREKWARIS
RETLEIYAPIAHRLGLNQTYRELQDLSFRHLKPWRYATLAKAVAKARGRRRDLIQKVQKE
VETAFSAASMTLRIAGREKTLYSIYRKMEEKHLSFAQVTDIYGFRLIVPNVIACYTGLGI
LHQMYKPLPGKFKDHIAIAKLNGYQSLHTTLVGPAGVSVEFQLRTEAMHVVAESGVAAHW
LYKAAEPNAASNDRLGTKWLQSLLDIQDETRDAAEFWDHVKVDLFPDAVYVFTPKSQIMA
LPRGATVVDFAYAIHSNIGDHTSAARINGDQVPLRTELKNGDVVEVITAPVSTPNPAWLG
FVRTGRARSKIRHYLKTLAHAESEGLGEKLLAQALRAEGLGKLPEEDEQHQALWEKLLRF
TGNRTRAELLTDIGLGKRIASIVAKRLMALMAEIGERPDALLLSRERFTSHEAVSQGAVT
LDGSENSSVRFAQCCRPIPGDQIVGYLGHGEGLVVHTDDCGVGQRLRNKDSERFFAVEWA
DEPTRAFETGVVITVRNDKGVLARVAATLADAEADITHVEMADETPQDSTDLRFVIAVRD
RAHLDAVLRAARRTASVLTAARTIPAP
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcggtcgccaaacctacgtcccctacgccgaaaccgagtccggcggcgttgaac
gcggccgccgcgagttttgccgcattgacggcccgcctcgactacctgagccccgaagac
accgagctggtgcgccgggcctaccgcttcgccgacgaagcccacctcgggcagctgcgc
aacagcggcgagccgtacatcacccaccccatcgccgtggcggcgcagtgcgccgagtgg
aagctcgacgcccaggcgctcatggccgcgctgctgcacgacgccatcgaagactgcggc
gtcaccaagccggaactcatcgagcgcttcggcgccccggttgccgagttggtcgacggg
ctcaccaagctcgacaagctgcagttcaacacgcgcgaagaaaaccaggccgagtccttc
cgcaagatgttgctggccatggcgcgcgatgtgcgcgtcatcctggtcaagctggccgac
cgcacacacaacatgcgcacgctggccgatgcgccgcgcgaaaagtgggcccgcatctcg
cgtgaaacgctcgagatctacgcccccatcgcgcaccggctgggcctgaaccagacctac
cgcgaactgcaggacctgtcgttccggcacctcaagccctggcgctacgccacgctggcc
aaggccgtcgccaaggcccgcggacgacgacgcgacctgatccagaaggtgcagaaagag
gtcgagacggccttctccgccgccagcatgacgctgcgcatcgcggggcgcgagaaaacg
ctctattccatctaccgcaagatggaagaaaagcacctgagcttcgcgcaggtcaccgac
atctacggcttccggctcatcgtgccgaacgtgatcgcctgctacacgggcctgggcatc
ctgcaccagatgtacaagccgctgcccggcaagttcaaggaccacatcgcgatcgccaag
ctcaacggctaccagtcactgcacaccacgctggtgggcccagctggcgtgagcgtggag
ttccagctgcgcaccgaggccatgcacgtcgtggccgaatcgggcgtggccgcgcactgg
ctctacaaggccgccgagcccaacgccgcgagcaacgaccggctgggcaccaagtggctg
cagtcgctgctcgacatccaggacgagacgcgcgacgccgccgagttctgggaccacgtc
aaggtcgacctgttccccgacgccgtctacgtcttcacgcccaagagccagatcatggcg
ctgccgcgcggcgccacggtggtcgacttcgcgtacgccatccacagcaatatcggcgac
cacacctcggccgcgcgcatcaatggcgaccaagtcccgctgcgcaccgagctgaagaac
ggcgacgtggtcgaagtgatcaccgcccccgtgtcgacgcccaaccccgcgtggctgggc
ttcgtgcgcaccggccgggcgcgctccaagatccgccactacctgaagaccctggcgcat
gccgagtccgaaggcctgggcgagaagctgctggcccaggcgctgcgcgccgaaggcctg
ggcaagctgcccgaggaagacgaacaacaccaggcgctgtgggagaagctgctgcgcttc
accggcaaccgcacccgcgccgagctgctgaccgacatcggcctgggcaagcgcatcgcc
agcatcgtcgccaagcggctcatggcgctgatggccgagatcggcgagcgccctgacgcc
ctcctcctgagccgcgagcgcttcacgtcgcacgaggccgtgtcacagggcgcggtgacg
ctcgatggcagcgagaactcttccgtgcgctttgcgcagtgctgccgccccattcccggc
gaccagatcgtcggctacctcggacacggcgaggggctggtggtgcacaccgacgactgc
ggcgtcggccagcgcctgcgcaacaaggacagcgaacgcttcttcgcggtcgaatgggcc
gacgagcccacgcgcgccttcgagaccggcgtggtcatcaccgtgcgcaacgacaagggc
gtgctggcccgcgtggcggccaccctggccgatgccgaagccgacatcacgcacgtggaa
atggcggacgagaccccacaggactcgaccgaccttcgcttcgtgatcgcggtgcgcgac
cgtgcgcacctcgacgccgtgctgcgcgccgcgcgccggaccgcgtcggtgctgaccgca
gcgcggacgattccggcgccctga
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