Variovorax sp. 38R: IG196_25485
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Entry
IG196_25485 CDS
T10235
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
vav Variovorax sp. 38R
Pathway
vav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IG196_25485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_25485
Transporters [BR:
vav02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
IG196_25485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
QOF77658
UniProt:
A0A7L8SCJ9
LinkDB
All DBs
Position
5496051..5497538
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AA seq
495 aa
AA seq
DB search
MLNRRTLLTTAGATVALATPLAGMAQGRKDAIVIGMALEPPGLDPTTGAAAAIAEVVQYN
ILETLTKINVDGSVTPLLAESWEISPDLKTYTFKLRKGVKFQNGEPFNASTVKFAFDRAG
GEKSTNKDKRTFANLATQVVDEHTVVVINKEIDPDLPFVLGQATAAIVEPKSVDTNATKP
IGTGPYKLDSWAKGSSITLSKWEGFRAPAVAKINKVTFRFISDTAAQAAAVLSGDVDVFT
RIGTRAVPQFRNNPQFQTILAGSRAKTILSINNKKKPLDDVRVRRAILAAIDRKAFIEGA
ADGLGVPIGSHYVPGAAGYVDTTGINPFDVEKAKKLLAEAGVKTPLELRMTLPPPPYARQ
GGEVIVAQLAKIGINVKIQNVEWAQWLSGTYGNKDYDLSIISHVEPFDLGNYAKSDYYWG
YQSKAFDTLFDKIKSTGNAAERNKLLGEAQKLLATDAANGFLYQPQFPTVAKKNVKGLWK
ENPIFVNDLSALSWG
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaccgtcgcaccctccttaccaccgccggcgccactgtcgccctggccactccg
ctggccggcatggcgcagggccggaaggacgccatcgtgatcggcatggccctggagccg
ccgggcctggacccgaccaccggcgccgccgccgccattgccgaggtcgtgcaatacaac
atcctggaaactctgaccaagatcaacgtcgatggcagcgtcacgccgctcctggccgag
agctgggaaatctcgcccgacctgaagacctacaccttcaaactgcgcaagggcgtcaag
ttccagaacggcgagcccttcaacgcgtccaccgtcaagttcgcgttcgaccgcgccggc
ggcgagaagagcaccaacaaggacaagcgcaccttcgccaacctcgccacgcaggtggtc
gacgagcacacggtcgtggtcatcaacaaggagatcgaccccgacctgcccttcgtgctg
ggccaggccacggccgccatcgtcgagcccaagagcgtcgacaccaacgccaccaagccg
atcggcaccggcccctacaagctggacagctgggccaagggctcgtcgatcacgctgagc
aagtgggaaggcttccgcgcccccgccgtcgccaagatcaacaaggtcaccttccgcttc
atctcggacaccgccgcgcaggccgccgccgtgctctcgggcgacgtcgacgtgttcacg
cgcatcggcacgcgcgccgtgccgcagttccgcaacaacccgcagttccagaccatcctg
gccgggtcgcgcgccaagaccatcctctcgatcaacaacaagaaaaagccgctcgacgac
gtgcgcgtgcgccgcgccatcctcgcggccatcgaccgcaaggccttcatcgagggcgcg
gccgacggcctgggcgtgccgattggcagccactacgtgccgggcgccgcgggctatgtc
gacaccacgggcatcaaccccttcgacgtcgagaaggccaagaagctgctcgccgaggcc
ggcgtgaagaccccgctcgaactgcgcatgaccctgcccccgccgccgtatgcgcgccag
ggcggcgaagtcatcgtggcccagctcgccaagatcggcatcaacgtgaagatccagaac
gtcgagtgggcgcagtggctcagcggcacctacggcaacaaggactacgacctgtcgatc
atttcgcacgtcgagcccttcgacctcggcaactacgccaagtccgactactactggggc
taccagtcgaaggccttcgacacgctgttcgacaagatcaagtccaccggcaacgcggcc
gagcgcaacaagctgctgggcgaggcgcagaagctgctggccaccgacgcggccaacggc
ttcctctaccagccgcagttcccgaccgtggccaagaagaacgtcaagggcctctggaaa
gagaacccgatcttcgtgaacgacctgtccgcgctgtcgtggggatga
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