Variovorax sp. 38R: IG196_25550
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Entry
IG196_25550 CDS
T10235
Name
(GenBank) RsmD family RNA methyltransferase
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
vav Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vav03009
]
IG196_25550
Enzymes [BR:
vav01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
IG196_25550
Ribosome biogenesis [BR:
vav03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
IG196_25550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
Methyltransf_31
RsmJ
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
QOF77670
LinkDB
All DBs
Position
complement(5508718..5509380)
Genome browser
AA seq
220 aa
AA seq
DB search
MPQKPTKKNAAAPASRAPAAKRPSRPNEVRIIGGEWKRTRLAVADKPGLRPTPDRVRETL
FNWLASLAGVGGGGLPGWHCIDAFAGTGALGLEAASRGAANVLLCEQDGALVAQLEAAKT
KLSAKAVRVERGNGVTALERAAAGSLQAVFLDPPFETVALYEPALRAAARALHADGAIYL
EAPRRWAAEELAALGLVEFRYLKAGAVHAHLLRRAVSVPA
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgccccagaagcccacaaaaaagaacgccgccgcgcctgcctcgcgcgcccccgccgcc
aagcgcccgtcgcggcccaacgaggtccgcatcatcggcggcgagtggaaacgcacccgc
ctcgccgtggccgacaagcccggcctgcgtcccacgcccgaccgtgtgcgcgaaacgctg
ttcaactggctcgcgagcctggccggcgtgggcggcggtgggctgccgggctggcactgc
atcgacgccttcgcgggcaccggcgcgctcggcctcgaagccgcctcgcgcggcgcggcc
aacgtgctgctctgcgagcaagacggcgcgctggtcgcccagctggaggccgccaagacc
aagctctcggccaaggccgtgcgcgtggaacgcggcaacggtgtcaccgcgctcgaacgt
gccgcggcgggcagcctgcaggcggtgtttctcgatccgcccttcgagaccgtcgcgctg
tacgagccggccctgcgcgccgcagcgcgcgcgctgcatgccgacggcgcgatctacctg
gaggcgccgcgccgctgggccgccgaagaactcgccgcgctcggcctcgtggaattccgc
tacctgaaggccggcgccgtgcatgcccatctgctgcggcgcgccgtgtccgtgcctgca
taa
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