Variovorax sp. 38R: IG196_25605
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Entry
IG196_25605 CDS
T10235
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
vav Variovorax sp. 38R
Brite
Transcription machinery [BR:
vav03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IG196_25605 (rpoH)
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QOF77680
UniProt:
A0A7L8SE48
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Position
5520783..5521724
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AA seq
313 aa
AA seq
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MTTLSGVSANQLAVANPWSMVPPLGNLDAYISAANRLPLLTLEEEQGFARKLRDQNDLEA
AGALILSHLRLVVSISRQYLGYGLPHGDLIQEGNVGLMKAVKRFDPDQGVRLVSYAMHWI
KAEIHEYILKNWRMVKVATTKAQRKLFFNLRSMKQSFKADSAAADNGTHRETLSPDEVSQ
MATRLNVKPEEVLEMETRLSGGDVLLDPGPSDDGDEGFGPIAYLADATQEPTALLESQQR
DRLSSDGIATALEALDDRSRRIVEERWLKVNDDGSGGMTLHDLAAVYGVSAERIRQIEVA
AMKKMKKALAEYA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgctgtctggagtctctgccaaccagctggccgtcgccaacccatggtcgatg
gtccccccgctgggcaacctggatgcctacatttcggccgccaaccgcctgccgctgctc
acgctcgaagaagagcagggcttcgcacgcaagttgcgcgaccagaacgacctcgaagct
gccggtgcgctgatcctgtcgcacctgcgcctggtcgtctccatttcccgccagtacctg
ggctacgggctgccgcacggcgacctgatccaggaaggcaacgtcggtctcatgaaggcc
gtgaagcgtttcgaccccgaccagggcgtgcggctggtgagctacgccatgcactggatc
aaggccgagatccacgagtacatcctgaagaactggcgcatggtcaaggtcgcgacgacc
aaggcccagcgcaagctgttcttcaatctgcgttcgatgaagcagagtttcaaggccgac
tcggccgcggccgacaacggcacgcaccgggaaacgctgagccccgacgaggtctcgcag
atggccacgcgcctgaacgtgaagcccgaggaagtgctcgagatggaaacccgcctgtcg
ggcggcgacgtgctgctcgatccgggtccgtccgatgacggcgacgaaggcttcggcccg
atcgcctacctggccgacgctacgcaggaaccgaccgcattgctcgaatcgcagcagcgc
gaccgcctgtcgagcgacggcatcgctaccgccctcgaggcgctggacgaccgcagccgc
cgcatcgtcgaagagcgctggctcaaggtgaacgacgacggctcgggcggcatgacgctg
cacgacctggccgcggtgtacggcgtgagcgccgagcgcatccgccagatcgaagtggcg
gcgatgaagaagatgaagaaggcgctggccgagtacgcgtaa
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