Variovorax sp. 38R: IG196_25855
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Entry
IG196_25855 CDS
T10235
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K14414
transcriptional regulatory protein RtcR
Organism
vav Variovorax sp. 38R
Brite
Transcription factors [BR:
vav03000
]
Prokaryotic type
Other transcription factors
Others
IG196_25855
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GFIT
Other DBs
NCBI-ProteinID:
QOF77727
UniProt:
A0A7L8SCT5
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Position
5566720..5568342
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AA seq
540 aa
AA seq
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MKPIVVIGFLGTQLDAGQGAGRWNKWRPTVSLAQHDDMVVARLELLHTRKHTALAEVVKA
DIAAVSPETTVNLVPFDLEDPWDFGEVYTRLYDWARAYPFQPEREQYWTHITTGTHVAQI
CMFLLSESRVVPGVLAQTSPPRKQRQGDAGKVALIDLDLSRYDPIARRFDADQRDAVAFL
KSGIATRNARFNALIDEIERVAVRSRAPILLVGPTGAGKSFLARRMFELKQARHQVTGPF
VEVNCATLRGDGAASTLFGHKKGSFTGAASDRAGLLRTAHQGALFLDEIGELGLDEQAML
LKAIEEKRFFPVGADKEVESDFQLIAGTHRDLRRDVAQGRFREDLFARINLWTYDLPGLA
QRPEDIEPNLDHLLALHAAENHRVVRFNAEARTAYLRFAQSSEALWRGNFRDLSASVTRL
ATLADGGRIAVALVEAEIARLRWLWKHEGTGASVAVDDEVDLEALRGEEKFAALDLFDRL
QLEAVVRVCRQSRSLSDAGRRLFQATRERRSVVNDADRLRKYLAKFKLEWSQTMNAQETT
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccatcgtcgtcatcggattcctcggcacccagctcgatgccggccagggcgcg
ggccgctggaacaagtggcgccccacggtctcgctcgcgcagcacgacgacatggtggtc
gcgcgcctcgagctgctgcacacgcgcaagcacacggcgctggccgaggtggtgaaggcc
gacatcgccgccgtgtcgcccgagaccacggtcaacctcgtgcccttcgacctcgaagac
ccgtgggacttcggcgaggtctacacgcgcctgtacgactgggcgcgcgcctaccccttc
cagcccgagcgcgagcagtactggacgcacatcaccacgggcacgcacgtggcgcagatc
tgcatgttcctgctgtccgaatcgcgcgtggtgccgggcgtgctggcgcagacctcgccg
ccgcgcaagcagcgccagggtgatgcgggcaaggtcgcgctgatcgacctcgacctgtcg
cgctacgacccgattgcacgccgcttcgacgccgaccagcgcgacgcggtcgcctttttg
aagagcggcatcgcaacgcgcaatgcgcgcttcaacgcgctcatcgacgagatcgagcgc
gtggccgtgcgctcgcgcgcgccgatcctgctggtggggccgacgggcgcgggcaagtcg
ttcctggcgcgccgcatgttcgagctgaagcaggcgcgccaccaggtgacggggccgttc
gtcgaggtgaactgcgccacgctgcgcggcgacggcgcggcgtccacgctgttcgggcac
aagaagggttcgttcaccggcgcggcgagcgaccgcgcggggctgctgcgcaccgcgcac
cagggcgcgctgtttctcgacgagatcggcgagttgggcctcgacgaacaggcgatgctg
ctcaaggccatcgaggaaaagcgtttcttccccgtgggcgccgacaaggaagtggagagt
gacttccagctcatcgccggcacccaccgcgacctgcgccgcgacgtggcgcaggggcgc
tttcgcgaagacctgttcgcgcgcatcaacctgtggacctacgacctgcccggcctcgcg
caacggcccgaagacatcgagcccaacctcgaccacctgctggccctgcacgcggccgag
aaccaccgcgtggtgcgcttcaacgccgaggcacgcacggcctacctgcgctttgcgcaa
agcagcgaggcgctctggcgcggcaacttccgcgacctgtcggcgagcgtgacgcggctc
gcgacgctggctgacggcgggcgcatcgcggtcgcgctggtcgaggcggagatcgcgcgg
ctgcgctggctgtggaagcacgaaggcacgggcgcgtcggtggcggtggacgatgaggtc
gacctggaagccctgcgcggcgaagagaagttcgccgcgctcgacctgttcgatcgcctg
cagctcgaagcggtggtgcgcgtgtgtcgccagtcccgcagcctttcggacgcagggcga
cgcctgttccaggccacacgcgagcggcgcagcgtggtcaacgatgcagatcgattgcga
aaatatctggcgaaattcaaactcgaatggagccagaccatgaacgctcaggaaactaca
tga
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