Variovorax sp. 38R: IG196_25900
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Entry
IG196_25900 CDS
T10235
Name
(GenBank) TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
vav Variovorax sp. 38R
Pathway
vav02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IG196_25900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_25900
Transporters [BR:
vav02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
IG196_25900
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
RRF
Motif
Other DBs
NCBI-ProteinID:
QOF77736
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All DBs
Position
complement(5575630..5576661)
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AA seq
343 aa
AA seq
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MPKALPHRLVATCIVLTSFLAAGLAAAQNIQERTFKFAFVNQKEHPQGMGAQRFSEIVEK
KSGGKMKVKLFPSGVLGGDASVIASLQGGTVEMTMAIPGLLSGMAREFSLFDLPFLFNNE
KEADFVLDGPVGRKLLDKLPEKGLIGLTYFEHGFRNVTNSRRPIARMEDLQGLKLRVMQI
PVMIDAFSALGANPSPLPLPEVYTALEQKAVDGQENPYSLVEASKYYEIQKYGSNTRHAF
NPVVLLFSKKRWEQLSEDERKILLDAARETQPFQRAANRDVNAKAAEFLKSKGMVLTEFP
AAERERLREKLVPVTDKHVKQIDPALTKELFSELGKARSSAAR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagctctgccgcatcgcctggtcgccacctgcatcgtcctgacctcgttcctg
gcggcaggcctcgccgctgcgcagaacatccaggagcgcaccttcaagttcgccttcgtc
aaccagaaggagcatccgcagggcatgggggcgcagcgcttctcggagatcgtcgagaag
aagagcggcggcaagatgaaggtgaagctctttccttcgggcgtgctcgggggcgatgcc
tcggtcattgcctcgctgcagggcggcacggtggaaatgacgatggcgatcccgggcctg
ctctcgggcatggcccgggagttctcgctgttcgacctgccgttcctgttcaacaacgag
aaggaagccgacttcgtgctcgatggcccggtcggccgcaagctgctggacaagctgccc
gagaaggggttgatcggcctcacgtacttcgagcacggctttcgcaacgtcaccaacagc
cggcgacccatcgcgcgcatggaagacctgcagggcctgaagctgcgcgtgatgcagatc
cccgtgatgatcgatgccttcagcgcgctgggtgccaacccgtcgccgctgccgctgccc
gaggtctacaccgcgctggagcagaaggccgtcgacggccaggaaaatccgtactcgctg
gtggaagcctcgaagtactacgagatccagaagtacggctccaacacgcggcacgcgttc
aaccccgtcgtgctgctgttcagcaagaagcggtgggagcagttgtcggaagacgaacgc
aagatcctgctcgatgcggcccgggagacgcagcccttccagcgcgccgccaaccgcgac
gtcaacgccaaggccgccgagttcctgaagagcaagggcatggtgctgaccgagttcccc
gccgccgagcgcgaacgcctgcgcgagaagctcgtgccggtcacggacaagcacgtcaag
cagatcgatccggcgctgacgaaagaactgttctccgagcttggcaaggcacgcagcagt
gccgccagatag
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