KEGG   Variovorax sp. 38R: IG196_26120
Entry
IG196_26120       CDS       T10235                                 
Name
(GenBank) HlyD family type I secretion periplasmic adaptor subunit
  KO
K12542  membrane fusion protein, adhesin transport system
Organism
vav  Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:vav00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vav02000]
    IG196_26120
   02044 Secretion system [BR:vav02044]
    IG196_26120
Transporters [BR:vav02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   IG196_26120
Secretion system [BR:vav02044]
 Type I secretion system
  Adhesin protein transporter
   IG196_26120
SSDB
Motif
Pfam: Beta-barrel_AprE HH_AprE BSH_CusB Biotin_lipoyl BSH_RND BSH_YknX BSH_LcnD MEDS PTS_EIIA_1
Other DBs
NCBI-ProteinID: QOF77772
LinkDB
Position
complement(5628729..5630045)
AA seq 438 aa
MKPDLPQVLQGESEKQAAQTTPQGRRRQWIIGGAVAVLAAVGLGFPMETVVVAPGRVIPS
DRVKSIQHLEGGIVSNVLVKDGDKVKQGQSLVEIDLGGSGLNFEELTARYAATQATRVRL
IAESRGQPLKRDSFDAEIDEAVLEGEVGAYQARALEQRGVMAGAVSALEQARSKQLEQQA
KAKGLADRLALMQKEQEISEQLLSEKLVGQVEVLEKRRQAEGVRSELAVARQGIISAQAA
ITEAQAKMAEAEGRYRRRASDELATVERQFASLSEDLARARTQRSRTVVKAPADGIVKGL
RSSSAGWVVKPGEAILEVVPDEDEIMVEARLNPNDRGFVEVDQLARVKITAYDYLRYGAV
DGKVKLVAADADRDAAIANGTPYYRLLISMSQSHVGRPENRVTAGMEAEVDLRVGTDPFI
WYILRPVLKLRREAFREP
NT seq 1317 nt   +upstreamnt  +downstreamnt
ttgaaaccagacttgccgcaggtgcttcagggcgagagcgagaaacaggcggcgcagacc
acgccgcaaggccggcggcgccagtggatcatcggcggcgcggtcgcggtgctggcggcg
gtggggctcggctttccgatggaaaccgtggtcgtcgcgccgggccgcgtgatcccctcc
gaccgcgtcaagtcgatccagcacttggaaggcggcatcgtcagcaacgtgctcgtgaaa
gacggcgacaaggtcaagcagggccaatcgctcgtcgagatcgacctgggcggcagcggc
ctgaacttcgaagagctcaccgcgcgttatgccgccacgcaggccacccgcgtgcgcctc
atcgccgagagccgcggccagccgctcaagcgcgattcgttcgatgcagagatcgacgaa
gccgtgctcgaaggcgaggtcggtgcctaccaggcgcgcgcgctcgaacagcgcggcgtc
atggccggcgccgtgtccgccctggaacaggcgcgcagcaagcagctcgagcagcaggcc
aaggccaagggcctggccgaccggctcgcgctgatgcagaaagagcaagaaatttccgaa
cagctgctcagcgaaaaactcgtcggccaggtcgaggtgctcgagaagcgccgccaggcc
gaaggcgtgcgcagcgaacttgccgtcgcgcgccagggcatcatctcggcgcaggccgcc
atcaccgaagcgcaggccaagatggccgaggccgaaggccgctaccgccgccgcgcatcg
gacgaactcgccaccgtcgaacgccagttcgccagcctgagcgaagacctcgcgcgcgcc
cgcacccagcgctcgcgcaccgtcgtcaaggcgccggccgacggcatcgtgaagggcctg
cgcagctccagcgccggttgggtcgtgaagcccggcgaagccatcctggaagtggtgccc
gacgaggacgagatcatggtcgaggcgcgcctcaacccgaacgaccgcggctttgtcgaa
gtggaccagctggcgcgcgtgaagatcaccgcctacgactacctgcgctacggcgccgtc
gacggcaaggtcaagctcgtggcggccgacgccgaccgcgacgccgccattgccaacggc
acgccgtactaccggctgctcatcagcatgtcgcagtcgcacgtggggcggccagaaaac
cgcgtcaccgccggtatggaggccgaagtcgatctgcgcgtgggaaccgatccgttcatc
tggtacatcctgcggcctgtgctcaaactgcggcgcgaagccttccgcgaaccatga

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