Variovorax sp. 38R: IG196_26195
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Entry
IG196_26195 CDS
T10235
Name
(GenBank) outer membrane protein assembly factor
KO
K07278
translocation and assembly module TamA
Organism
vav Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_26195
Transporters [BR:
vav02000
]
Other transporters
Pores ion channels [TC:
1
]
IG196_26195
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Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_TamA_1
Omp85_2
Motif
Other DBs
NCBI-ProteinID:
QOF77784
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Position
5647412..5649337
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AA seq
641 aa
AA seq
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MVRVASVLSPALWPALLFSGVLLLQGCSLLPKKEAADTGAPTVGVVRSADADSNKDDDKA
KADGRRRAFTVDVRGPETERDYLTRHLEIQRYRELDDLGVTEVSRLMVAAEANARELLGT
LGYFTPTLTLELKETPDSTEAPREVVITVAPGERTRVSTVQIRYAGQIADDPTAEAQRDA
IRTGWALRAGEPFTQGAWDDAKTTALRSLTARRFPTGSVEVSRAEVDADRHEARLGVTYQ
SGPAYKFGPLVLRGVERYDADAARRIARLPTGTDYDQQKLLDAQQRLASSGYYDSVFLTL
DTDNNTPLAAPVTAQLREAPLQKVVMGVGFTTDNGPRLSIDHTHNRMPLLGWRAVSRLSL
DNDIQSLGTEWNAVPNDRGWRWFAGGELKSEQSGSYVVDSGRLRGGQSKSSDHIDRSLFL
QYDYAHNRGTDAPPSASAVTANWGWTGRYFDDNSAPSRGYGLALEMAAGYTLTGQQLPFT
RTYARFLGVLPLGAADDKNARARRSRLQMRLEAGAVAAKESAQIPSTLMFLTGGDTTVRG
YSYKQIGTVRADGKTVSGRYLGVASLEWQRPFVYKDKLTEWESVVFVDAGAVADKPGELK
PKVGVGVGARWRSPIGPVQADLAYGVDSKKFRLHFRLGFTF
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggtcagggtggcatccgttctttcgccggcgttgtggccggctttgcttttttccggc
gtcctgctcttgcaaggctgcagcctgctgcctaaaaaagaggcggcagacacgggcgcg
cccaccgtcggcgtggtgcgcagcgccgatgccgacagcaacaaggacgacgacaaggcc
aaggccgacggccggcgccgcgccttcaccgtcgacgtgcgcggccccgagaccgagcgc
gactacctcacgcgccacctcgagatccagcgctaccgcgagctcgacgacctgggcgtg
accgaggtctcgcgcctcatggtcgcggccgaagccaatgcgcgcgagctgctgggcacg
ctgggctacttcacgcccacgctcacgctcgaactcaaggaaacgcccgacagcaccgag
gccccgcgcgaggtcgtcatcaccgtcgcgcccggcgagcggacccgggtgtcgaccgtg
cagatccgctacgccggccagatcgccgacgaccccaccgccgaagcacagcgcgacgcc
atccgcaccggctgggcgctgcgtgccggcgagcctttcacccagggggcgtgggacgac
gccaagaccaccgcgctgcgcagcctcacggccaggcgctttcccaccggcagcgtggaa
gtcagccgcgccgaggtcgatgccgaccgccacgaagcccgcctcggcgtgacctaccag
tcgggcccggcctacaagttcggcccgctggtgctgcgcggcgtggagcgctacgacgcc
gacgccgcgcgccgcatcgcgcgcctgcccaccggcaccgactacgaccagcagaagctg
ctcgacgcgcagcagcgcctggccagcagcggctactacgactcggtgttcctcacgctc
gacaccgacaacaacacgccgctggccgcgcccgtgaccgcccagctgcgcgaggcgccg
ctgcagaaggtcgtgatgggtgtcggcttcaccaccgacaacggcccgcgcctgtcgatc
gaccacacccacaaccgcatgccgctgctcggctggcgcgcggtgtcgcggctctcgctg
gacaacgacatccagtcgctgggcaccgagtggaacgccgtgcccaacgaccgcggctgg
cgctggttcgccggcggcgaactcaagagcgagcagtcgggcagctacgtggtcgacagc
ggccgcctgcgcggcgggcaaagcaagtcgagcgaccacatcgaccgcagcctgttcctg
caatacgactacgcccacaaccgcggcaccgacgcgccgccctcagcctcggcggtcacc
gccaactggggctggaccgggcgctacttcgacgacaactcggcgccctcgcgcggctac
ggcctggcgctcgaaatggccgcgggctacacgctcaccggccagcaactgcccttcacc
cgcacctacgcgcgctttctcggcgtgctgccactgggcgcggccgacgacaagaacgcc
cgtgcgcgccgcagccggctgcagatgcgcctggaggccggcgccgtcgccgccaaggag
agcgcgcagatcccgtccacgctgatgttcctcaccggcggcgacaccaccgtgcgcggc
tacagctacaagcagatcggcaccgtgcgcgccgacggcaagaccgtgtcgggccgctac
ctcggcgtggccagcctcgaatggcagcgccccttcgtctacaaggacaagctcaccgaa
tgggagagcgtggtgttcgtcgatgccggcgccgtggccgacaagcccggcgagctcaag
cccaaggtcggcgtgggcgtcggcgcgcgctggcgcagccccatcggccccgtgcaggcc
gacctggcctacggcgtcgactcgaagaaattccgcctgcacttccgtctcggcttcacc
ttctga
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