Variovorax sp. 38R: IG196_26265
Help
Entry
IG196_26265 CDS
T10235
Name
(GenBank) branched-chain amino acid ABC transporter ATP-binding protein/permease
KO
K01995
branched-chain amino acid transport system ATP-binding protein
K01998
branched-chain amino acid transport system permease protein
Organism
vav Variovorax sp. 38R
Pathway
vav02010
ABC transporters
vav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IG196_26265
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IG196_26265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_26265
Transporters [BR:
vav02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
IG196_26265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
ABC_tran
BCA_ABC_TP_C
AAA_21
AAA_29
RsgA_GTPase
AAA_23
MMR_HSR1
AAA_27
MukB
SMC_N
HMUDK_HMUD1
AAA_30
AAA_22
SID-1_RNA_chan
Motif
Other DBs
NCBI-ProteinID:
QOF77795
LinkDB
All DBs
Position
complement(5664546..5666327)
Genome browser
AA seq
593 aa
AA seq
DB search
MKRLMHPAAVVLVAAVLCGLVSLSGNDYYLRIAFMMCVYYLCAAGMNVLVGYAGQKSLGQ
AGLFAAGAYAVALITSRTELSPWLALVIAAVVSGVCGVLIALPSLRVKGPYLAMVTLAFG
IVVEKLVGEWTDVFGGAQGIYGIRPLTWNGQPLSSVQWVILGIVLSAALHLLLRNLLQGR
FGRALLSLQADEIASSSVGVRVYRAKVMAFVVAAVTCGIAGALVAQQNQYINSDFITFHL
SIFILLLVLFGGAGSMYGPIVGAVLLTATDALLARWPSAQHFLYGFLLLFALYVMPGGVV
GLFNKWFLKSRHRGEGPGGNGVPGQIGPGGEGELLVVQGVTKSYGGVKPAQDVSFRLQRG
HIHALIGPNGAGKSTMINMLTGVVEPDAGVIRFLGRNIVGQPAHTICCLGMGRTFQNLRL
FADLSVLDNVMLGRHSRMSNGFLSSLVAWPTAGKQERATRDRALQLLDLVGLGHLAHWPA
GSLPYGLQRRVELARALATEPQLLLLDEPAAGLNPQETAELGELLVRIGKCGVSILMVEH
HMDLVMSISDHVIVLDYGVKIAEGKPAEVQSNPRVVEAYLGVDDEEDMAAVPA
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcctgatgcatcccgccgccgtggtgctcgtggcggccgtgctgtgcgggctc
gtctcgctgtccggcaacgactactacctgcgcatcgccttcatgatgtgcgtctactac
ctgtgcgccgccggcatgaacgtgctggtcggctacgcggggcagaaatcgctgggccag
gccggcctgttcgcggccggtgcctacgcggtcgcgctcatcacctcgcgcaccgagctg
agcccgtggctcgcgctggtgatcgcggccgtggtctcgggcgtgtgcggcgtgctcatt
gcactgccctcgttgcgcgtgaagggcccgtaccttgcgatggtcacgctggccttcggc
atcgtggtcgagaagctcgtgggcgaatggaccgacgtgttcggcggcgcgcagggcatc
tacggcatccgcccgctgacctggaacggccagccgctgagcagcgtgcaatgggtgatc
ctgggcatcgtgctcagcgccgcgctgcacctgctgctgcgcaacctgctgcagggccgc
ttcggccgtgcgctgctgtcgctgcaggcggacgagatcgcctcgtcgtcggtgggcgtg
cgcgtgtaccgcgccaaggtcatggccttcgtggtcgcggccgtcacctgcggcatcgcg
ggcgcgctcgtggcgcagcagaaccagtacatcaactccgacttcatcaccttccacctg
tcgatcttcatcctgctgctggtgctgttcggcggcgcgggctcgatgtacggccccatc
gtgggcgcggtgctgctcactgcgaccgacgcgctgctcgcgcgctggccttcggcgcag
cacttcctgtacggctttttgctgctgttcgcgctgtacgtcatgccgggcggcgtggtg
ggcctgttcaacaagtggttcctgaagtcgcgccatcgcggcgaagggccgggcggcaac
ggcgtgccgggccagatcggtcccggcggcgaaggcgagctgctggtggtgcagggcgtg
accaagtcgtacggcggcgtgaagcccgcgcaggacgtgtcgttccgcctgcagcgcggc
cacatccacgcgctcatcggcccgaacggtgccggcaagagcaccatgatcaacatgctc
accggcgtggtcgaacccgacgcgggcgtgatccgcttcctgggccgcaacatcgtgggc
cagccggcgcacaccatctgctgcctgggcatgggccgcaccttccagaacctgcgtttg
ttcgccgatctctcggtgctcgacaacgtgatgctcgggcggcacagccgcatgagcaac
ggcttcctgtcgtcgctcgtggcctggcccacggccggcaagcaggagcgcgccacgcgc
gaccgcgcgctgcagctgctcgacctcgtgggcctgggccacctggcgcactggcccgcc
ggcagcctgccctacggcctgcagcgccgcgtggaactggcgcgcgcgctggccaccgag
ccgcagctgctgctgctcgacgagcccgccgccggcctcaatccgcaggagaccgccgag
ctcggcgaactgctggtgcgcatcggcaaatgcggcgtgtcgatcctgatggtggagcac
cacatggacctcgtgatgtcgatctccgaccacgtgatcgtgctcgactacggcgtgaag
atcgccgaaggcaagcccgccgaggtgcagtcgaatccgcgcgtggtcgaggcctacctg
ggcgtcgacgacgaagaagacatggccgccgtgcccgcctga
DBGET
integrated database retrieval system
