Variovorax sp. 38R: IG196_26275
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Entry
IG196_26275 CDS
T10235
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vav Variovorax sp. 38R
Pathway
vav02010
ABC transporters
vav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IG196_26275
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IG196_26275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_26275
Transporters [BR:
vav02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
IG196_26275
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Paralog
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GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Cytochrom_C
Motif
Other DBs
NCBI-ProteinID:
QOF77797
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All DBs
Position
complement(5667304..5668503)
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AA seq
399 aa
AA seq
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MKTIRLYKTLLATAAFAAFSAGAYAQEIKLGYNGDLSASPSAQSGQAAVLGMEAAIADLN
AAGGALGRKFTLVTRDDVSAPPKSIQNMSDLVDNEKVVAVFGPTNSGNAMAWKHIANQKK
IPVLGNVGSGTDITKPMSPGADNYMFRVSMVDREQVAALMAYVKRNTAGSKVVGLMAETT
GYGQGGLKDMEEIAKLQDIKIAATERFGVGDTDMTSQLSKMKAANVDTVVVWAQGTPIAQ
LVRSMEKINYFPLTLTSWAADNITFYDAAGKALAEKPIFMRTVSETRTPAQQKLFDRIGS
KLKAPGSFSFALHGYDSVLLLAQAMKQANSTDGAAVRVALEDLKTPVQGVLKTYEKPFSK
TNHEALTAKDLVWIRWKDGKLLPYSDALIGALKPADFKQ
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgatccgtctgtacaagaccctgctcgcgaccgccgccttcgctgcgttcagt
gccggtgcttacgcgcaagaaatcaagctcggctacaacggcgacctctcggcctcgcct
tcggcacagagcggccaggccgcggtgctgggcatggaggcggccattgccgacctgaac
gccgccggcggcgcgctcggacggaagttcacgctggtcacgcgcgacgacgtctcggcg
ccgccgaagtcgatccagaacatgagcgacctggtcgacaacgaaaaggtggtggcggtg
ttcggccccaccaactcgggcaacgccatggcctggaagcacatcgccaaccagaagaag
atccccgtgctgggcaacgtgggttcgggcaccgacatcaccaagccgatgagccccggc
gccgacaactacatgttccgcgtctcgatggtcgaccgcgaacaggtcgccgcgctcatg
gcctacgtgaagcgcaacacggccggctccaaggtcgtgggcctcatggccgagaccacc
ggctacggtcaaggcggcctgaaggacatggaagaaatcgccaagctgcaggacatcaag
atcgcggccaccgagcgcttcggcgtcggcgacaccgacatgacctcgcagctcagcaag
atgaaggccgccaatgtcgacaccgtcgtggtgtgggcgcagggcacgcccatcgcgcag
ctggtgcgcagcatggagaagatcaactacttcccgctgacgctcacctcgtgggcggcc
gacaacatcaccttctacgacgcggccggcaaggcgctggccgagaagccgatcttcatg
cgcaccgtgagcgaaacgcgcacgcccgcgcagcagaagctgttcgaccgcatcggcagc
aagctgaaggcgccgggctcgttctcgttcgcgctgcacggctatgactcggtgctgctg
ctggcccaggccatgaagcaggccaacagcaccgatggcgccgccgtgcgtgtcgcgctc
gaagacctgaagacgccggtgcagggcgtgctcaagacctacgagaagcccttcagcaag
accaaccacgaagccctgacggcgaaagacctggtctggatccgctggaaggacggcaag
ctgctgccctacagcgacgcgctgatcggtgcgctcaagccggccgacttcaagcaataa
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