Variovorax sp. 38R: IG196_26325
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Entry
IG196_26325 CDS
T10235
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vav Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vav03400
]
IG196_26325
Enzymes [BR:
vav01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
IG196_26325
DNA repair and recombination proteins [BR:
vav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
IG196_26325
Prokaryotic type
IG196_26325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QOF77806
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Position
5677030..5678532
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AA seq
500 aa
AA seq
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MPPILLAVDKTYPKGLMWFRRDLRVDDNAALYRALRACRQVVCVFVFDRAILDALPRADR
RVEFIRESLVELEAELRGLGSGLIVRHAVAAEEIPALAHTLDVQAVFANRDDEPDALARD
ARVLGALANTGISFHTFKDSTVFDRDEVMTKAGLPYTVFTPYKRAWLAKVDSFFLKSYPV
RSHADALAPPPPALNAPVPTLGEIGFESTNLQTLEIPTGTRGAGALFEDFFERIDRYDEA
RNFPAVRGPSYMGVHLRFGTVSIRQLASVAHQLALQGNTGAATWLSELVWRDFYFQILAH
FPHVHANGESKSFRPEYDKIQWLHGKHADQLFDAWCEGRTGYPLVDAAMLQIRQSGYMHN
RLRMVVASFLCKDLGLDWRRGERYFAEHLNDFELASNNGGWQWASSTGCDAQPYFRIFNP
VTQSERFDPEGKFIRRYLPQLAGLSNVAIHAPWTASPVELEAAGVKLGDNYPTPVVDHAE
AREKTMQRYATARSKAMQKP
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgattttactggccgtcgataagacctatcccaaagggctcatgtggttccgc
cgggacctccgggtggacgacaacgcagcgctgtaccgggcgctgcgggcctgtcggcag
gtggtgtgcgttttcgtgttcgaccgggccatcctggacgccctgccccgcgcggaccgg
cgggtcgaattcatccgcgaatcgctggtggagctcgaagccgagctgcgcgggctgggc
agcgggctgatcgtgcgacacgcggtggccgccgaagagattccggcgctggcccacaca
ctcgacgtgcaggccgtgttcgccaaccgcgacgacgaacccgacgccctggcgcgcgac
gcccgcgtgctcggcgcgctggccaatacgggcatcagcttccacaccttcaaggacagc
acggtcttcgaccgcgacgaggtcatgaccaaggccggcctgccctataccgtgttcacg
ccgtacaagcgggcctggctggcgaaggtggattcgttcttcctgaagtcgtaccccgtg
cgcagccacgccgacgcgctcgcgccgccgcccccggccctgaatgcgccggtgcccacg
ctgggcgagatcggctttgaaagcaccaacctccagacgctggagattcccaccggcacg
cgcggcgcgggcgcgctgttcgaagatttcttcgagcgcatcgaccgctacgacgaggcc
cgcaacttcccggccgtgcgcggtccgagctacatgggcgtgcacctgcgcttcggcacg
gtgtcgatccgccagctggccagcgtggcgcaccagctggcgctgcagggcaacaccggg
gccgcgacctggctcagcgagttggtctggcgcgacttctacttccagatcctggcgcac
tttccgcacgtgcacgccaacggcgaatcgaagagctttcgccccgagtacgacaagatc
cagtggctccacggcaagcacgccgaccagctgttcgacgcctggtgcgaaggccgcacc
ggctacccgctggtcgatgcggcgatgctgcagatccggcagagcggctacatgcacaac
cggctgcgcatggtggtggcgagcttcctgtgcaaggacctggggctggactggcggcgc
ggcgaacgctactttgcagagcacctcaacgacttcgagctggcctcgaacaacggcggc
tggcaatgggccagctcgaccggctgcgacgcccagccctacttccgcatcttcaacccg
gtgacgcagagcgaacgcttcgaccccgaaggcaagttcatccgccgctacctgccgcag
ctcgcagggctgtcgaacgtggcgattcatgcgccatggacggcgtcgccggtcgagctg
gaggcggcgggtgtcaagttgggcgacaactacccgacgccggtggtggaccacgccgag
gcgcgcgaaaagacgatgcagcgctatgcgacggcgcggagcaaggccatgcagaagccg
tag
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