Variovorax sp. 38R: IG196_26445
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Entry
IG196_26445 CDS
T10235
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
vav Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vav03000
]
IG196_26445
Transcription factors [BR:
vav03000
]
Prokaryotic type
Helix-turn-helix
LacI family
IG196_26445
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_3
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
QOF77829
UniProt:
A0A7L8SD39
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Position
5705895..5706983
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AA seq
362 aa
AA seq
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MATIKDVALQAGVSVTTVSHVVNDTRHVSAKVRERVELAIRELGYVPNAMARSLKSNTTS
TLGMLIPNSSNPYFAEIVRIVEDRCFGAGYTLVLCNTDDEPRRQSVYLQVLAERRIDGLI
VVSTGADEDDSLATQLRGLRIPTVLVDREIADPACDLVETAHMQGGLLAVRHLLSLGHKR
IACIGGPVGVTSSEQRIEGWRMALAETGSAPNADALLWRGGFTSQGGYEAMHAILRTEQK
PSAVFVCNDLMAIGALRAAHESGVRVPDELSIVGFDDIELSAYTSPPLTTVAQPKERIGA
LAVDMLLERMGGKRRDARKVVLQPELRVRASTARHAGFREAGVTPTASATTATTTSSKSR
TS
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatcaaggacgttgcactccaggcgggcgtttccgtcaccaccgtgtcgcac
gtcgtcaacgacacacgccacgtgagcgccaaggtgcgcgagcgcgtggagctggcgatt
cgcgagctgggctacgtgcccaacgcgatggcgcgcagcctcaagagcaacaccacctcg
acgctgggcatgctcattcccaacagctcgaacccctatttcgccgagatcgtgcgcatc
gtggaagaccgctgcttcggcgccggctacacgctggtgctgtgcaacaccgacgacgag
ccccggcgccagagcgtgtacctgcaggtgctggccgagcgccgcatcgacgggctcatc
gtggtgtcgaccggcgccgacgaagacgactcgctcgccacgcagttgcgcggcctgcgc
attcccaccgtgctggtcgaccgcgagatcgccgacccggcctgcgacctggtggaaacc
gcccacatgcagggcggcctgctcgccgtgcggcacctgctgtcgctgggccacaagcgc
atcgcctgcatcggcgggccggtgggcgtgacgtcgagcgagcagcgcatcgaaggctgg
cgcatggcgctggcggagaccggctcggcacccaacgccgacgcgctgctgtggcgcggc
ggcttcaccagccagggcggctacgaggcgatgcacgccatcctgcgcaccgagcagaag
ccctcggccgtgttcgtgtgcaacgacctgatggccatcggcgcgctgcgtgccgcacac
gaaagcggcgtgcgcgtgcccgacgaactgtcgatcgtgggcttcgacgacatcgaactg
tcggcctacaccagcccgccgctcaccaccgtggcccagcccaaggagcgcatcggcgcg
ctggcggtcgacatgctgctggagcgcatgggcggcaagcgccgcgacgcacgcaaggtc
gtgctgcaacccgagctgcgcgtgcgcgcctcgaccgcgcgccacgcgggctttcgcgaa
gcgggcgtgacgcccaccgcatcggccactaccgccaccaccacatcttccaagtcccgc
acctcgtga
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