Variovorax sp. 38R: IG196_26700
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Entry
IG196_26700 CDS
T10235
Name
(GenBank) ABC transporter ATP-binding protein
KO
K01995
branched-chain amino acid transport system ATP-binding protein
Organism
vav Variovorax sp. 38R
Pathway
vav02010
ABC transporters
vav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IG196_26700
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IG196_26700
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_26700
Transporters [BR:
vav02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
IG196_26700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
BCA_ABC_TP_C
AAA_21
MMR_HSR1
AAA_29
AAA_23
AAA_22
SMC_N
RsgA_GTPase
AAA_27
AAA_16
KdpD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QOF77874
LinkDB
All DBs
Position
complement(5755998..5756819)
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AA seq
273 aa
AA seq
DB search
MIHDNDRGDKKNTPLLRIDAVSVRFGGIVALDGVSFDVRRGQICGLIGPNGAGKSTLFNC
LSRLYECSAGRIEFDGHPLTRLPRHRMAGLGIGRTFQNLALFRTMTVRDNVLVGCHSKHH
AGFLRNAFRLPGVAAIESQARARADQLIHFLDLEAVAEREVADLPFGTQKRVELARALAA
EPQLLLLDEPACGLNHEELESLGTLIRDIRDRLNVTVLLVEHHMSLVMGVSDQVVALNFG
KKIAEGTPAEVRAHPEVIRAYLGEEEEEAEAMA
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgattcatgacaacgatcgcggagacaagaagaacacccccctgttgcgcatcgacgcg
gtgtcggtgcgcttcggcggcatcgtggcgctcgacggcgtctcgttcgacgtgcggcgg
ggccagatctgcggcctcatcggaccgaacggggcgggcaagagcacgctgttcaactgt
ctctcgcgcctgtacgagtgcagcgccggccgcatcgagttcgacggccatccgctcacg
cgcctgccgcgccaccgcatggcgggcctgggcatcgggcgcaccttccagaacctggcg
ctgtttcgcacgatgaccgtgcgcgacaacgtgctggtgggttgccacagcaagcaccac
gcgggctttctgcgcaacgccttccggctgcccggcgtggcggccatcgagtcgcaggcg
cgggcacgggccgaccagctgatccactttctcgacctcgaggccgtggccgagcgcgaa
gtggccgacctgcctttcggcacgcagaagcgcgtcgagctggcacgcgcgctggcggcc
gagccgcagttgctgctgctcgacgagccagcctgcggcctgaaccacgaagagctcgaa
agcctgggcacgctgatccgcgacatccgcgaccgcctgaacgtgacggtgctgctggtc
gagcaccacatgagccttgtgatgggcgtgtcggaccaggtggtggcgctcaacttcggc
aagaagatcgccgagggcacgccggccgaggtgcgcgcgcaccccgaggtgatccgcgcc
tacctgggtgaagaggaagaagaagcggaggcgatggcatga
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