Variovorax sp. 38R: IG196_27040
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Entry
IG196_27040 CDS
T10235
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
vav Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vav03009
]
IG196_27040
Enzymes [BR:
vav01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
IG196_27040
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
IG196_27040
Ribosome biogenesis [BR:
vav03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
IG196_27040
23S rRNA modification factors
IG196_27040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_25
Methyltransf_23
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
QOF77938
UniProt:
A0A7L8SDD0
LinkDB
All DBs
Position
complement(5831191..5832027)
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AA seq
278 aa
AA seq
DB search
MRADQLLVERGMAASRSQAVRLIAGGMRWRDAGTSDAWRNVVKNKDEVPESAELELADAA
EARYVSRGGLKLEGALAVSGVDPTGKLCLDVGQSTGGFTDCLLQHGAAKVVGIDVGHGQL
HPRMREDERVVAIEGVNARALSPADLQVDEGDDEDAEVGEVAEVVEAPPEPRFDLIVGDL
SFISLTLVLPAVVQFLSDDGQLLMLVKPQFELQPGQVGKGGIVRDEAMYAVVEKRLHDAC
AALDLKVLRWFESPIAGGDGNREFFIHAVRAAKAGDGS
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgctgatcaactgttggtagaacgcggcatggccgcgtcgcgttcgcaagccgtc
cggctcatcgccggcggcatgcgctggcgtgatgcgggcacgagcgacgcgtggcgaaat
gtcgtcaagaacaaggacgaagtgcccgagtcggccgagctcgagctcgccgacgccgcc
gaggcacgctacgtgtcgcgcggcggcctcaagctcgaaggtgcgctggcggtcagcggc
gtggacccgacgggcaagctgtgcctggacgtgggccagtcgaccggcggcttcaccgac
tgcctgttgcagcacggtgccgccaaggtggtgggcatcgatgtgggccacgggcagctg
catccgcgcatgcgcgaagacgaacgcgtggtcgccatcgaaggcgtcaatgcgcgggcg
ttgtcgccggccgatctgcaggtggacgagggcgatgacgaagacgccgaagtgggcgag
gtcgccgaagtggtcgaagccccgcccgagccgcgcttcgacctcatcgtcggcgacctg
tcgttcatctcgctcacgctggtgctgccggccgtggtgcagttcctgtccgacgacggc
cagttgctgatgctggtcaagccgcagttcgaactgcagcccggccaggttggcaagggc
ggcatcgtgcgcgacgaagcgatgtacgcggtggtcgagaagcgcctgcacgacgcctgc
gcggcgctcgatctgaaggtgctgcgctggttcgagagcccgatcgccgggggcgacggc
aaccgcgagtttttcattcacgccgttcgtgctgccaaggccggcgacggttcctaa
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