Variovorax sp. 38R: IG196_27185
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Entry
IG196_27185 CDS
T10235
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
vav Variovorax sp. 38R
Pathway
vav00280
Valine, leucine and isoleucine degradation
vav00650
Butanoate metabolism
vav00907
Pinene, camphor and geraniol degradation
vav01100
Metabolic pathways
vav01120
Microbial metabolism in diverse environments
vav04146
Peroxisome
Module
vav_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
IG196_27185
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
IG196_27185
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
IG196_27185
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
IG196_27185
Enzymes [BR:
vav01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
IG196_27185
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GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
QOF77963
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Position
complement(5866981..5867901)
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AA seq
306 aa
AA seq
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MKLPAQVKLVDVGPRDGLQNEKQPVSAEVKIGLVHRLQDAGLKEIEVTSFVSPKWVPQMA
DNAEVMHGITRKPGVLYSVLTPNLKGFEAAIAAPREEWPDEIVVFGAASEAFSQKNINCS
IAESIERFAPVVEAARAKGIAVRGAMSCTVGCPYEGEIDPSKVGYLAQLMKGIGVQRVDV
ADTIGVGTPRKVQAAMEATLAHFDVDAISGHFHDTYGQALVNTLAALELGVWNFQSSSAG
LGGCPYAKGATGNVATEDVVYMLHGMGIATGIDLDKLIDAGVYISEALGREPNSRASKAI
RTKRAG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaaactccccgcccaggtcaagctcgtcgacgtcggtccgcgcgacggcctccagaac
gaaaagcaacccgtgtccgccgaggtcaagatcggcctcgtgcaccgcctgcaggacgcc
ggcctgaaggagatcgaggtcaccagcttcgtctcgcccaagtgggtgccgcagatggcc
gacaacgccgaggtgatgcacggcatcacgcgcaagccgggcgttctctactcggtgctc
acgcccaacttgaagggcttcgaggccgccattgccgcgccgcgcgaagaatggcccgac
gagatcgtggtgttcggcgccgcgagcgaggccttcagccagaagaacatcaactgctcg
atcgccgagagcatcgagcgcttcgcgcccgtggtcgaggcggcacgcgcgaagggcatc
gccgtgcgcggcgcgatgtcgtgcacggtgggctgcccctacgaaggcgagatcgatccg
tccaaggtcggctacctcgcgcaactgatgaagggcatcggcgtgcagcgcgtggacgtg
gccgacaccatcggcgtgggcacgccgcgcaaggtgcaggcggccatggaggccacgctg
gcgcacttcgatgtcgacgccatctccggccacttccacgacacctatgggcaggcgctg
gtcaacacgctggcggcgctcgaactgggcgtgtggaacttccagtcgtcgtcggccggc
ctgggtggctgtccctatgccaagggcgcgacgggcaacgtcgcgacggaagacgtggtc
tacatgctgcacggcatgggcatcgcgaccggcatcgacctggacaagctgatcgacgcg
ggcgtgtacatcagcgaagcactgggccgcgaaccgaactcgcgcgcctcgaaggccatc
cgcaccaagcgcgcgggctga
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