Variovorax sp. 38R: IG196_27235
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Entry
IG196_27235 CDS
T10235
Name
(GenBank) acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
vav Variovorax sp. 38R
Pathway
vav00280
Valine, leucine and isoleucine degradation
vav01100
Metabolic pathways
Module
vav_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
IG196_27235
Enzymes [BR:
vav01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
IG196_27235
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
BT_MCC_alpha
ATP-grasp
Biotin_lipoyl_2
Dala_Dala_lig_C
HlyD_3
HlyD_D23
LAL_C2
GCV_H
RnfC_N
NQRA_N
ATP-grasp_3
ATP-grasp_4
DUF2118
GARS_A
Motif
Other DBs
NCBI-ProteinID:
QOF77973
UniProt:
A0A7L8SF35
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All DBs
Position
complement(5875546..5877549)
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AA seq
667 aa
AA seq
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MFKKILIANRGEIACRVAATARRMAIRTVAVYSDADAHANHVRACDESVYLGGSAPKDSY
LRWEKILEAAKATGAEAVHPGYGFLSENEEFAQACADAGLAFIGPPPSAIKAMGLKAESK
QLMEKAGVPLVPGYHGSDQDPALLQREADRIGYPVLIKASAGGGGKGMRAVDKAADFEAA
LASCKREAINSFGDDAVLIEKYVQRPRHIEIQVFGDTQGNYVYLFERDCSVQRRHQKVLE
EAPAPGMTEAMRKEMGDAAVAAARAVNYVGAGTVEFIVEQREGGEMNFFFMEMNTRLQVE
HPVTEAITGLDLVEWQLRVASGEPLPAKQSELQIHGHAIEARICAENPDNNFLPATGTLR
VYRKPQATAFQRSRVRIDDGVREGGEISPFYDSMIAKLIVHGSTRAEALARLDAALAQVQ
IVGVSTNVQFLRGILATESFSKANLDTALIERERAVLFDREPLGLPLAAAAAITRTLVTE
APVGVPDPFERRDGWRAHGEYKRRFDFEFRGAEHSALLTYRRDGGLNLEVGGVNGPLTVG
RFPTGEFELEFAGTRQTLDVHLDGATAHVFASKGATRLTAIDRLAHAGDTHAEGGRLTAP
MPGKVVSFAVKAGDKVSRGQPLAVMEAMKMEHTIAAPADGTVEELMFSPGEQVAEGDELL
RMAAAAA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagaagatcctgattgccaatcgtggcgagattgcctgccgcgtcgcggccact
gcgcgccgcatggccatccgcacggtcgccgtgtactccgatgccgacgcgcatgccaac
cacgtgcgcgcctgcgacgagtcggtgtacctcggcggcagcgccccgaaggacagctac
ctgcgctgggaaaagatcctcgaagccgccaaggccacgggcgccgaagccgtgcacccg
ggctacggcttcctgagcgagaacgaagagttcgcacaggcctgcgccgacgccggcctg
gccttcatcggcccgccgccctcggcgatcaaggccatgggcctgaaggccgagtcgaag
caactgatggaaaaggccggcgtgccgctggtgcccggctaccacggcagcgaccaggac
ccggcgctgctgcagcgcgaagccgaccgcatcggctacccggtgctcatcaaggccagc
gccggcggcggtggcaagggcatgcgtgcggtcgacaaggccgccgacttcgaggccgcg
ctggcctcgtgcaagcgcgaagccatcaacagcttcggcgacgacgcggtgctgatcgag
aagtacgtgcagcgcccgcgccacatcgagatccaggtgttcggcgacacgcaaggcaac
tacgtctacctgttcgagcgcgactgctcggtgcagcgccgccaccagaaggtgctcgaa
gaggcgcccgcgcccggcatgaccgaggcgatgcgcaaggaaatgggcgatgcggccgtg
gccgcggcacgcgccgtgaactacgtgggtgcgggcaccgtcgagttcatcgtcgagcag
cgcgaaggcggcgagatgaacttcttcttcatggagatgaacacgcgcctgcaggtggag
catccggtgacggaagcgatcaccggcctcgacctcgtcgaatggcagctgcgcgtggcc
tcgggcgagccgttgcctgccaagcaatcggaactgcagattcacggccacgccatcgag
gcgcgcatctgcgccgagaaccccgacaacaacttcctgcctgccaccggcacgctgcgc
gtgtaccgcaagccgcaagccacggcgttccagcgcagccgcgtgcgcatcgacgacggt
gtgcgcgagggtggcgagatctcgcccttctacgactcgatgatcgccaagctcatcgtg
cacggcagcacgcgcgccgaagcgctggcccggctcgacgccgcgctggcccaggtgcag
atcgtgggcgtgtcgaccaacgtgcagttcctgcgcggcatcctggcgaccgagtcgttc
tcgaaggccaacctcgacaccgcgctcatcgagcgcgaacgcgccgtgctgttcgaccgc
gagccgctgggcctgccgctggccgcggccgccgccatcacgcgcacgttggtcaccgaa
gcaccggtcggcgtgcccgaccccttcgagcgccgcgacggctggcgtgcgcacggcgag
tacaagcgccgcttcgacttcgagttccgcggcgccgagcacagcgcgctgctgacctac
cgccgcgacggcggcctgaacctggaagtgggcggcgtgaatggcccgctgacggtcggc
cgctttcccacgggcgagttcgagctcgaattcgcgggcacgcgccagaccctcgacgtg
cacctggacggcgccaccgcccacgtgttcgcgtcgaagggcgccacgcgcctcacggcc
atcgaccgcctcgcccacgcgggcgacacccacgccgaaggtggccgcctcacggcgccg
atgcccggcaaggtcgtgtccttcgcggtcaaggccggcgacaaggtcagccgaggccag
ccgctggccgtgatggaagccatgaagatggaacacaccatcgccgcgccggccgacggc
acggtggaagaactgatgttctcgccgggcgagcaggtggcggaaggcgacgaattgttg
cgaatggctgcggcagccgcttaa
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