Variovorax sp. 38R: IG196_27525
Help
Entry
IG196_27525 CDS
T10235
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
vav Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_27525
Transporters [BR:
vav02000
]
Other transporters
Pores ion channels [TC:
1
]
IG196_27525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QOF78023
LinkDB
All DBs
Position
complement(5937752..5940091)
Genome browser
AA seq
779 aa
AA seq
DB search
MKQHSRALAIAMAFPLSAPVWAQQQTPPDVDPPEAGAAAAPGRALGTVTISGGRPTSLPT
QIPTTIEGVTAEQIAETVNATDAEDALKYLPSLLVRKRYIGDFNHAVLATRASGTGNSAR
AMVYADGIMLSNPLGNGATFAPRWGMVSPDEIERVDVLYGPFSAAYPGNSVGAVVDYVTR
MPTQLEAHVKLSGFASNFDLDKSHSSPGGQQLDLSLGSRSGDWSWWLGASRTHSKGQALS
FANRLVSAGTVGTAGTPVTGAVLGLNPSNQPWWLLGGTTAYDTTQEQAKLKLAYDFSPTV
RATYTLGAWHNTTHGSTDTYLRDALGQPVYGGRVNLGGRTYTLDAPATAFAPTETALTHY
MHGLSVKSHTGGAFDWEVAASLFDYAKDTSRTPTVALPGAFYGGPGRTTDMGGAGWHTFK
AAGTWRPTGSAEGVGAHVVDFGVQQDTARLRSAIGNTRDWIGGPAVSPFSAFNGNTRLRS
LYVQDTWRFAKDWKTTLGLRHERWEAYGGQLGNAAKLLDFAPRKNSFVSPKAALAWQATP
DWLFKASTGRAVRMPTVSELYQGSIEGNRIVNTNPNLRPERSWTAELSAERDLKRWGLDG
VLRTTLFFEHTKDALYTQALTNLVSTVQNVDAIRTRGLEVALNTVDAGIQGLDLSGSLTL
TDSKITANSGFPASVGRDQPRVPKVRASLLATYRPDAKWSYTVGARYSGRQYGTLDNSDP
NGMAFMGFSKFFVVDARIRYRIDRQWSAAVGIDNLNNRTYWAFHPYPQRTFVAELKFDL
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagcactcccgcgccctggcgatcgccatggcatttcctctcagcgcgccggtg
tgggcgcagcagcaaacgccgccggacgttgatccgcccgaggccggcgctgcggccgcc
ccgggccgcgcactcggcaccgtcaccatcagcggtggccgcccgacctcgctgccgacg
cagatcccgaccaccatcgaaggcgtgacggccgagcagatcgccgagacggtcaacgcc
accgacgccgaagacgcgctcaagtacctgccgagcctgctggtgcgcaagcgctacatc
ggcgacttcaaccacgcggtgctcgccacccgcgcctcgggcacgggcaacagcgcgcgc
gcgatggtctacgccgacggcatcatgctgtcgaacccgctgggcaacggcgccaccttc
gcgccgcgctggggcatggtgtcgcccgacgagatcgagcgcgtcgacgtgctctacggt
ccgttctcggcggcctacccgggcaactcggtgggcgccgtggtcgactacgtgacgcgc
atgcccacgcagctcgaggcgcacgtcaagctcagcggcttcgcctcgaacttcgacctg
gacaagagccattcgtcgccgggcggccagcagctcgacctgtcgctgggcagccgcagc
ggcgactggtcgtggtggctcggcgcctcgcgcacccacagcaaggggcaggcgctgtcg
ttcgccaaccggctcgtgagcgccggcactgtcggcacggcgggcacgcccgtcactggc
gcggtgctcgggctgaacccgtcgaaccagccgtggtggctgctcggcggcacgaccgct
tacgacacgacccaggagcaggccaagctcaagctggcctacgacttctcgcccacggtg
cgcgccacctacacgctgggcgcctggcacaacaccacgcacggcagcaccgacacctac
ctgcgtgacgcgctcgggcagcccgtgtacggcgggcgcgtgaacctcggcgggcgcacc
tacaccctcgatgcgccggccaccgccttcgcaccgaccgagacggcgctcacgcactac
atgcacggcctttcggtgaagagccacacgggcggcgcgttcgactgggaagtggcggcg
agcctgttcgactacgccaaggacacctcgcgcacgccgaccgtggcgctgcccggcgcg
ttctacggcggccccggccgcaccaccgacatgggcggcgccggctggcacaccttcaag
gccgcgggcacctggcggcctaccggctcggccgaaggcgtgggcgcgcacgtggtcgat
ttcggtgtccagcaagacaccgcgcggctgcgcagcgccatcggcaacacgcgcgactgg
atcggcgggccggccgtgtcgccgttctccgccttcaacggcaacacgcggctgcgctcg
ctctacgtgcaggacacgtggcgcttcgccaaagactggaagaccacgctgggcctgcgc
cacgagcgctgggaagcgtacggcggccagctcggcaacgcggcgaagctgctcgacttc
gcgccgcgcaagaacagcttcgtctcgcccaaggccgcgctcgcctggcaggccacgccc
gactggctcttcaaggcctcgaccggccgcgccgtgcgcatgcccaccgtgagcgagctc
taccagggctcgatcgaaggcaaccgcatcgtcaacaccaacccgaacctgcgccccgag
cgttcgtggaccgccgagctgagcgccgagcgcgacctcaagcgctgggggctcgacggc
gtgctgcgcaccacgctgttcttcgagcacacgaaagacgcgctctacacccaggcgctc
accaacctcgtgagcacggtgcagaacgtcgacgccatccgcacgcgcgggctggaggtg
gcgttgaacacggtcgacgcaggcatccaggggctggacctcagcggcagcctcacgctg
accgattcgaagatcaccgccaacagcggcttcccggccagcgtcgggcgtgaccagccg
cgcgtgcccaaggtgcgcgcctcgctgctcgccacctaccggcccgacgccaagtggagc
tacaccgtcggcgcgcgctacagcggccggcagtacggcacgctcgacaacagcgacccg
aacggcatggccttcatgggcttctcgaagttcttcgtggtcgatgcgcgcatccgctac
cgcatcgaccgccagtggagcgccgccgtcggcatcgacaacctcaacaaccggacctac
tgggccttccacccgtacccgcaacgcaccttcgtggccgaactcaagttcgacctttga
DBGET
integrated database retrieval system
