KEGG   Variovorax sp. 38R: IG196_27640
Entry
IG196_27640       CDS       T10235                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
vav  Variovorax sp. 38R
Pathway
vav00061  Fatty acid biosynthesis
vav00071  Fatty acid degradation
vav01100  Metabolic pathways
vav01212  Fatty acid metabolism
vav02024  Quorum sensing
vav04146  Peroxisome
Module
vav_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:vav00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    IG196_27640
   00071 Fatty acid degradation
    IG196_27640
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    IG196_27640
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    IG196_27640
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:vav01004]
    IG196_27640
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vav04147]
    IG196_27640
Enzymes [BR:vav01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     IG196_27640
Lipid biosynthesis proteins [BR:vav01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   IG196_27640
Exosome [BR:vav04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   IG196_27640
  Exosomal proteins of breast cancer cells
   IG196_27640
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: QOF82099
UniProt: A0A7L8SQ36
LinkDB
Position
complement(5964210..5965823)
AA seq 537 aa
MKELPPRVQQPLHAYLRDHARTRGDAAACLWYGRALSWAELDRASDAFAARLQALGVAKG
EPVVLFLNNCPQYLVAHFGIQKIGAIVCPSGPLNKEHELAYQVNDLKARVIVAAAPLLPV
VRKVQAESALAHVFVVHYADLLPAEPTLDLPAELAAERTAERSVPEGCEDFFAVMRSSAT
PQPVAIDMEDIALMTYTSGTTGLPKGAMLSYGNALYKTRAAADCNGVGPDDVLLSIAPLY
HIAGMLMGVNVPVLSGAASVLLHRFDPRTVLQAIATYNVSWWYSIAPMNVACMQVPDIAR
FDLASLKMNPVTSFGIAFTEPLAAQWRSHANHCSSFEAAYGLSETHTCDTYTPHEAPRWG
TQGVPVPGVTIRIIDTETQADMPTGEVGEIVLTSAGSFKGYWNKPEATAATLRNGWVHTG
DMGKLDADGYLTFIGRFKEMIKVSGYSVFPEEVETILIKHPAVAQAAVIAQPDPEKGEVV
KAFIVRKPGATLEADALVAWARENMASYKAPRAVSFIDALPTTGAGKVLRRLLKDKT
NT seq 1614 nt   +upstreamnt  +downstreamnt
ctgaaagagctgccgcctcgcgtgcagcagccgctgcacgcctacctgcgcgaccacgca
cgcacgcgcggcgacgccgccgcctgcctctggtacggccgggccctgagctgggccgag
ctcgatcgcgcgagcgacgccttcgccgcgcgcctgcaggccctgggcgtggccaagggc
gagcccgtggtgctgttcctcaacaactgcccgcagtacctcgtggcgcacttcggcatc
cagaagatcggcgccatcgtctgcccgagcgggccgctcaacaaggagcacgagctggcc
taccaggtcaacgacctgaaggcgcgcgtgatcgtcgcggccgcgccgctcctgccggtg
gtgcgcaaggtgcaggccgagagcgcactcgcgcatgtgttcgtcgtgcactacgccgac
ctgctgcccgccgagcccacgctcgacctgccggccgaactcgccgccgagcgcacggcc
gaacgcagcgtgcccgaaggctgcgaagacttcttcgccgtgatgcgcagcagcgccacg
ccgcagcccgtcgccatcgacatggaggacatcgcgctcatgacctacacctcgggcacc
actggcctgcccaagggcgcgatgctcagctacggcaacgcgctctacaagacgcgcgcc
gcggccgactgcaacggcgtggggccggacgacgtgctgctgtcgatcgcgccgctgtat
cacatcgccggcatgctcatgggcgtcaacgtgcccgtgctcagcggcgccgcctcggtg
ctgctgcaccgcttcgacccgcgcaccgtgctgcaggccattgccacctacaacgtcagc
tggtggtacagcatcgcgccgatgaacgtggcctgcatgcaggtgcccgacatcgcccgc
ttcgatctggctagcctgaagatgaacccggtgaccagcttcggcatcgccttcaccgaa
ccgctggccgcgcagtggcgctcgcacgcgaaccactgcagctccttcgaggccgcttac
ggcctgagcgaaacccacacctgcgacacctacacgccgcacgaagcgccgcgctggggc
acgcagggcgtgccggtgccgggcgtgaccatccgcatcatcgacaccgagacccaggcc
gacatgcccacgggcgaagtcggcgagatcgtgctcaccagcgccggctcgttcaagggc
tactggaacaagcccgaggccacggccgccaccttgcgcaacggctgggtgcacacgggc
gacatgggcaagctcgacgccgacggctacctcaccttcatcggccgcttcaaggaaatg
atcaaggtctcgggctacagcgtgttccccgaagaggtcgagaccatcctcatcaagcac
ccggcggtggcgcaggcggccgtcattgcgcagcccgatcccgagaagggcgaggtcgtg
aaggccttcatcgtgcgcaagcccggcgccacgctcgaggccgatgcgctcgtggcctgg
gcgcgcgagaacatggcgagctacaaggcgccgcgcgccgtgagcttcatcgacgcactg
ccgaccaccggcgcgggcaaggtgctgcgccgcctgctcaaagacaagacctga

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