Variovorax sp. 38R: IG196_27770
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Entry
IG196_27770 CDS
T10235
Name
(GenBank) TetR family transcriptional regulator
KO
K03577
TetR/AcrR family transcriptional regulator, acrAB operon repressor
Organism
vav Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vav03000
]
IG196_27770
Transcription factors [BR:
vav03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
IG196_27770
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_N
TetR_C_2
PA2201_N
Motif
Other DBs
NCBI-ProteinID:
QOF78066
LinkDB
All DBs
Position
complement(5990206..5990880)
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AA seq
224 aa
AA seq
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MVARRTKEEALATRHRLLDAAELLFQAQGVSQTTLQQIAQQAGATRGAIYWHFKDKADLF
NAMMERVILPLETPPKSEAPGGSDDPLAEIEEGMVHALTLMVTDLQVRRVFDIATHKVEY
THDMASVQQRHLDARNACVVDFEKALRLAARRARIKLPMPGAMAAQGMHALIGGLIQNWL
LDPTAFDLVPTGRRTFRVYLAGLGFPRTPAGGVPTAQDAETAPA
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
ttggtggcacgtcgtacgaaggaagaagcactggcaacgcggcatcgattgctcgatgcc
gcggagctgttgtttcaggcgcaaggtgtgtcgcagaccacgctgcagcagattgcgcag
caggccggcgcgacccggggtgccatctattggcacttcaaggacaaggctgacctgttc
aacgccatgatggagcgcgtgatcctgcctctggaaacgccgcccaagagtgaggcgccc
ggcggcagcgacgacccgctggccgagatcgaagaaggcatggtccacgcgctgacgctc
atggtcaccgacctgcaggtgcggcgcgtgttcgacatcgcgacccacaaggtcgaatac
acgcatgacatggcctcggtgcagcagcgccacctcgacgcccgcaacgcctgcgtggtc
gatttcgaaaaggccctgcggctggccgcgcggcgcgcccgcatcaagctgccgatgccc
ggcgcgatggccgcgcagggcatgcacgcgctcatcggcgggctgatccagaactggctg
ctcgaccccacggccttcgaccttgtgcccactggccggcgcaccttccgcgtctacctg
gccgggctgggtttcccgcgcacgccggccggtggcgtcccgacggcgcaggacgcagaa
accgcccccgcctga
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